Literature DB >> 15170510

Peptide synthesis through evolution.

K Tamura1, R W Alexander.   

Abstract

Ribosome-catalyzed peptide bond formation is a crucial function of all organisms. The ribosome is a ribonucleoprotein particle, with both RNA and protein components necessary for the various steps leading to protein biosynthesis. Evolutionary theory predicts an early environment devoid of complex biomolecules, and prebiotic peptide synthesis would have started in a simple way. A fundamental question regarding peptide synthesis is how the current ribosome-catalyzed reaction evolved from a primitive system. Here we look at both prebiotic and modern mechanisms of peptide bond formation and discuss recent experiments that aim to connect these activities. In particular, RNA can facilitate peptide bond formation by providing a template for activated amino acids to react and can catalyze a variety of functions that would have been necessary in a pre-protein world. Therefore, RNA may have facilitated the emergence of the current protein world from an RNA or even prebiotic world.

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Year:  2004        PMID: 15170510     DOI: 10.1007/s00018-004-3449-9

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  64 in total

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Journal:  Circulation       Date:  1989-08       Impact factor: 29.690

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Review 9.  Exercise testing for chronotropic assessment.

Authors:  B L Wilkoff; R E Miller
Journal:  Cardiol Clin       Date:  1992-11       Impact factor: 2.213

10.  Diagnostic and prognostic value of ST segment depression limited to the recovery phase of exercise stress test.

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Journal:  Heart       Date:  2004-12       Impact factor: 5.994

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  8 in total

Review 1.  Ribosome evolution: emergence of peptide synthesis machinery.

Authors:  Koji Tamura
Journal:  J Biosci       Date:  2011-12       Impact factor: 1.826

Review 2.  The RNA world on ice: a new scenario for the emergence of RNA information.

Authors:  Alexander V Vlassov; Sergei A Kazakov; Brian H Johnston; Laura F Landweber
Journal:  J Mol Evol       Date:  2005-07-13       Impact factor: 2.395

3.  Chiral-selective aminoacylation of an RNA minihelix: Mechanistic features and chiral suppression.

Authors:  Koji Tamura; Paul R Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-01       Impact factor: 11.205

4.  Principles of chemical geometry underlying chiral selectivity in RNA minihelix aminoacylation.

Authors:  Tadashi Ando; Shunichi Takahashi; Koji Tamura
Journal:  Nucleic Acids Res       Date:  2018-11-30       Impact factor: 16.971

5.  Mass spectrometry of analytical derivatives. 1. Cyanide cations in the spectra of N- alkyl-N-perfluoroacyl- α-amino acids and their methyl esters.

Authors:  Nino G Todua; Kirill V Tretyakov; Anzor I Mikaia
Journal:  Eur J Mass Spectrom (Chichester)       Date:  2015       Impact factor: 1.067

Review 6.  Molecular basis for chiral selection in RNA aminoacylation.

Authors:  Koji Tamura
Journal:  Int J Mol Sci       Date:  2011-07-22       Impact factor: 5.923

7.  Primitive templated catalysis of a peptide ligation by self-folding RNAs.

Authors:  Norimasa Kashiwagi; Hiroyuki Furuta; Yoshiya Ikawa
Journal:  Nucleic Acids Res       Date:  2009-03-05       Impact factor: 16.971

8.  Peptide Bond Formation between Aminoacyl-Minihelices by a Scaffold Derived from the Peptidyl Transferase Center.

Authors:  Mai Kawabata; Kentaro Kawashima; Hiromi Mutsuro-Aoki; Tadashi Ando; Takuya Umehara; Koji Tamura
Journal:  Life (Basel)       Date:  2022-04-12
  8 in total

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