Literature DB >> 15167894

The ribosomal protein Rps15p is required for nuclear exit of the 40S subunit precursors in yeast.

Isabelle Léger-Silvestre1, Philipp Milkereit, Sébastien Ferreira-Cerca, Cosmin Saveanu, Jean-Claude Rousselle, Valérie Choesmel, Cécile Guinefoleau, Nicole Gas, Pierre-Emmanuel Gleizes.   

Abstract

We have conducted a genetic screen in order to identify ribosomal proteins of Saccharomyces cerevisiae involved in nuclear export of the small subunit precursors. This has led us to distinguish Rps15p as a protein dispensable for maturation of the pre-40S particles, but whose assembly into the pre-ribosomes is a prerequisite to their nuclear exit. Upon depletion of Rps15p, 20S pre-rRNA is released from the nucleolus and retained in the nucleus, without alteration of the pre-rRNA early cleavages. In contrast, Rps18p, which contacts Rps15p in the small subunit, is required upstream for pre-rRNA processing at site A2. Most pre-40S specific factors are correctly associated with the intermediate particles accumulating in the nucleus upon Rps15p depletion, except the late-binding proteins Tsr1p and Rio2p. Here we show that these two proteins are dispensable for nuclear exit; instead, they participate in 20S pre-rRNA processing in the cytoplasm. We conclude that, during the final maturation steps in the nucleus, incorporation of the ribosomal protein Rps15p is specifically required to render the pre-40S particles competent for translocation to the cytoplasm.

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Year:  2004        PMID: 15167894      PMCID: PMC423291          DOI: 10.1038/sj.emboj.7600252

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  35 in total

1.  Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16 S RNA.

Authors:  Ditlev E Brodersen; William M Clemons; Andrew P Carter; Brian T Wimberly; V Ramakrishnan
Journal:  J Mol Biol       Date:  2002-02-22       Impact factor: 5.469

Review 2.  Making ribosomes.

Authors:  Alessandro Fatica; David Tollervey
Journal:  Curr Opin Cell Biol       Date:  2002-06       Impact factor: 8.382

3.  Nuclear export of 60s ribosomal subunits depends on Xpo1p and requires a nuclear export sequence-containing factor, Nmd3p, that associates with the large subunit protein Rpl10p.

Authors:  O Gadal; D Strauss; J Kessl; B Trumpower; D Tollervey; E Hurt
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

4.  Bms1p, a novel GTP-binding protein, and the related Tsr1p are required for distinct steps of 40S ribosome biogenesis in yeast.

Authors:  D Gelperin; L Horton; J Beckman; J Hensold; S K Lemmon
Journal:  RNA       Date:  2001-09       Impact factor: 4.942

5.  Synthetic lethality with conditional dbp6 alleles identifies rsa1p, a nucleoplasmic protein involved in the assembly of 60S ribosomal subunits.

Authors:  D Kressler; M Doère; M Rojo; P Linder
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

6.  Processing of 20S pre-rRNA to 18S ribosomal RNA in yeast requires Rrp10p, an essential non-ribosomal cytoplasmic protein.

Authors:  E Vanrobays; P E Gleizes; C Bousquet-Antonelli; J Noaillac-Depeyre; M Caizergues-Ferrer; J P Gélugne
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

7.  Factors affecting nuclear export of the 60S ribosomal subunit in vivo.

Authors:  T Stage-Zimmermann; U Schmidt; P A Silver
Journal:  Mol Biol Cell       Date:  2000-11       Impact factor: 4.138

8.  A pre-ribosome-associated HEAT-repeat protein is required for export of both ribosomal subunits.

Authors:  Marlene Oeffinger; Mensur Dlakic; David Tollervey
Journal:  Genes Dev       Date:  2004-01-16       Impact factor: 11.361

9.  Nmd3p is a Crm1p-dependent adapter protein for nuclear export of the large ribosomal subunit.

Authors:  J H Ho; G Kallstrom; A W Johnson
Journal:  J Cell Biol       Date:  2000-11-27       Impact factor: 10.539

10.  Ultrastructural localization of rRNA shows defective nuclear export of preribosomes in mutants of the Nup82p complex.

Authors:  P E Gleizes; J Noaillac-Depeyre; I Léger-Silvestre; F Teulières; J Y Dauxois; D Pommet; M C Azum-Gelade; N Gas
Journal:  J Cell Biol       Date:  2001-12-10       Impact factor: 10.539

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  57 in total

1.  Genetic and biochemical interactions among Yar1, Ltv1 and Rps3 define novel links between environmental stress and ribosome biogenesis in Saccharomyces cerevisiae.

Authors:  Jesse W Loar; Robert M Seiser; Alexandra E Sundberg; Holly J Sagerson; Nasreen Ilias; Pamela Zobel-Thropp; Elizabeth A Craig; Deborah E Lycan
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

2.  Ribosomal proteins L7 and L8 function in concert with six A₃ assembly factors to propagate assembly of domains I and II of 25S rRNA in yeast 60S ribosomal subunits.

Authors:  Jelena Jakovljevic; Uli Ohmayer; Michael Gamalinda; Jason Talkish; Lisa Alexander; Jan Linnemann; Philipp Milkereit; John L Woolford
Journal:  RNA       Date:  2012-08-14       Impact factor: 4.942

3.  Genetic interactions show the importance of rRNA modification machinery for the role of Rps15p during ribosome biogenesis in S. cerevisiae.

Authors:  Clément Bellemer; Pauline Chabosseau; Franck Gallardo; Pierre-Emmanuel Gleizes; Guillaume Stahl
Journal:  PLoS One       Date:  2010-05-03       Impact factor: 3.240

4.  Distinct cytoplasmic maturation steps of 40S ribosomal subunit precursors require hRio2.

Authors:  Ivo Zemp; Thomas Wild; Marie-Françoise O'Donohue; Franziska Wandrey; Barbara Widmann; Pierre-Emmanuel Gleizes; Ulrike Kutay
Journal:  J Cell Biol       Date:  2009-06-29       Impact factor: 10.539

5.  A local role for the small ribosomal subunit primary binder rpS5 in final 18S rRNA processing in yeast.

Authors:  Andreas Neueder; Steffen Jakob; Gisela Pöll; Jan Linnemann; Rainer Deutzmann; Herbert Tschochner; Philipp Milkereit
Journal:  PLoS One       Date:  2010-04-19       Impact factor: 3.240

6.  Cracking pre-40S ribosomal subunit structure by systematic analyses of RNA-protein cross-linking.

Authors:  Sander Granneman; Elisabeth Petfalski; Agata Swiatkowska; David Tollervey
Journal:  EMBO J       Date:  2010-05-07       Impact factor: 11.598

7.  TOR-dependent reduction in the expression level of Rrn3p lowers the activity of the yeast RNA Pol I machinery, but does not account for the strong inhibition of rRNA production.

Authors:  Anja Philippi; Robert Steinbauer; Alarich Reiter; Stephan Fath; Isabelle Leger-Silvestre; Philipp Milkereit; Joachim Griesenbeck; Herbert Tschochner
Journal:  Nucleic Acids Res       Date:  2010-04-25       Impact factor: 16.971

8.  The Noc-domain containing C-terminus of Noc4p mediates both formation of the Noc4p-Nop14p submodule and its incorporation into the SSU processome.

Authors:  Holger Kühn; Thomas Hierlmeier; Juliane Merl; Steffen Jakob; Almass-Houd Aguissa-Touré; Philipp Milkereit; Herbert Tschochner
Journal:  PLoS One       Date:  2009-12-18       Impact factor: 3.240

9.  Analysis of ribosome biogenesis factor-modules in yeast cells depleted from pre-ribosomes.

Authors:  Juliane Merl; Steffen Jakob; Katrin Ridinger; Thomas Hierlmeier; Rainer Deutzmann; Philipp Milkereit; Herbert Tschochner
Journal:  Nucleic Acids Res       Date:  2010-01-25       Impact factor: 16.971

10.  Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA.

Authors:  Marlene Oeffinger; Daniel Zenklusen; Angelica Ferguson; Karen E Wei; Aziz El Hage; David Tollervey; Brian T Chait; Robert H Singer; Michael P Rout
Journal:  Mol Cell       Date:  2009-12-11       Impact factor: 17.970

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