Literature DB >> 11071906

Factors affecting nuclear export of the 60S ribosomal subunit in vivo.

T Stage-Zimmermann1, U Schmidt, P A Silver.   

Abstract

In Saccharomyces cerevisiae, the 60S ribosomal subunit assembles in the nucleolus and then is exported to the cytoplasm, where it joins the 40S subunit for translation. Export of the 60S subunit from the nucleus is known to be an energy-dependent and factor-mediated process, but very little is known about the specifics of its transport. To begin to address this problem, an assay was developed to follow the localization of the 60S ribosomal subunit in S. cerevisiae. Ribosomal protein L11b (Rpl11b), one of the approximately 45 ribosomal proteins of the 60S subunit, was tagged at its carboxyl terminus with the green fluorescent protein (GFP) to enable visualization of the 60S subunit in living cells. A panel of mutant yeast strains was screened for their accumulation of Rpl11b-GFP in the nucleus as an indicator of their involvement in ribosome synthesis and/or transport. This panel included conditional alleles of several rRNA-processing factors, nucleoporins, general transport factors, and karyopherins. As predicted, conditional alleles of rRNA-processing factors that affect 60S ribosomal subunit assembly accumulated Rpl11b-GFP in the nucleus. In addition, several of the nucleoporin mutants as well as a few of the karyopherin and transport factor mutants also mislocalized Rpl11b-GFP. In particular, deletion of the previously uncharacterized karyopherin KAP120 caused accumulation of Rpl11b-GFP in the nucleus, whereas ribosomal protein import was not impaired. Together, these data further define the requirements for ribosomal subunit export and suggest a biological function for KAP120.

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Year:  2000        PMID: 11071906      PMCID: PMC15036          DOI: 10.1091/mbc.11.11.3777

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  92 in total

1.  Exportin 1 (Crm1p) is an essential nuclear export factor.

Authors:  K Stade; C S Ford; C Guthrie; K Weis
Journal:  Cell       Date:  1997-09-19       Impact factor: 41.582

2.  Processing of the precursors to small nucleolar RNAs and rRNAs requires common components.

Authors:  E Petfalski; T Dandekar; Y Henry; D Tollervey
Journal:  Mol Cell Biol       Date:  1998-03       Impact factor: 4.272

3.  The asymmetric distribution of the constituents of the Ran system is essential for transport into and out of the nucleus.

Authors:  E Izaurralde; U Kutay; C von Kobbe; I W Mattaj; D Görlich
Journal:  EMBO J       Date:  1997-11-03       Impact factor: 11.598

4.  RanBP1 is crucial for the release of RanGTP from importin beta-related nuclear transport factors.

Authors:  F R Bischoff; D Görlich
Journal:  FEBS Lett       Date:  1997-12-15       Impact factor: 4.124

5.  Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3' end formation of 5.8S rRNA in Saccharomyces cerevisiae.

Authors:  J de la Cruz; D Kressler; D Tollervey; P Linder
Journal:  EMBO J       Date:  1998-02-16       Impact factor: 11.598

6.  Dbp5p, a cytosolic RNA helicase, is required for poly(A)+ RNA export.

Authors:  S S Tseng; P L Weaver; Y Liu; M Hitomi; A M Tartakoff; T H Chang
Journal:  EMBO J       Date:  1998-05-01       Impact factor: 11.598

7.  Fal1p is an essential DEAD-box protein involved in 40S-ribosomal-subunit biogenesis in Saccharomyces cerevisiae.

Authors:  D Kressler; J de la Cruz; M Rojo; P Linder
Journal:  Mol Cell Biol       Date:  1997-12       Impact factor: 4.272

8.  Importin/karyopherin protein family members required for mRNA export from the nucleus.

Authors:  M Seedorf; P A Silver
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-05       Impact factor: 11.205

9.  Yeast heat shock mRNAs are exported through a distinct pathway defined by Rip1p.

Authors:  C A Saavedra; C M Hammell; C V Heath; C N Cole
Journal:  Genes Dev       Date:  1997-11-01       Impact factor: 11.361

10.  A nuclear import pathway for a protein involved in tRNA maturation.

Authors:  J S Rosenblum; L F Pemberton; G Blobel
Journal:  J Cell Biol       Date:  1997-12-29       Impact factor: 10.539

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  73 in total

Review 1.  Transport into and out of the nucleus.

Authors:  I G Macara
Journal:  Microbiol Mol Biol Rev       Date:  2001-12       Impact factor: 11.056

2.  A nuclear AAA-type ATPase (Rix7p) is required for biogenesis and nuclear export of 60S ribosomal subunits.

Authors:  O Gadal; D Strauss; J Braspenning; D Hoepfner; E Petfalski; P Philippsen; D Tollervey; E Hurt
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

3.  A novel conserved RNA-binding domain protein, RBD-1, is essential for ribosome biogenesis.

Authors:  Petra Björk; Göran Baurén; ShaoBo Jin; Yong-Guang Tong; Thomas R Bürglin; Ulf Hellman; Lars Wieslander
Journal:  Mol Biol Cell       Date:  2002-10       Impact factor: 4.138

4.  Cic1p/Nsa3p is required for synthesis and nuclear export of 60S ribosomal subunits.

Authors:  Alessandro Fatica; Marlene Oeffinger; David Tollervey; Irene Bozzoni
Journal:  RNA       Date:  2003-12       Impact factor: 4.942

5.  Autoregulation in the biosynthesis of ribosomes.

Authors:  Yu Zhao; Jung-Hoon Sohn; Jonathan R Warner
Journal:  Mol Cell Biol       Date:  2003-01       Impact factor: 4.272

6.  The homologous putative GTPases Grn1p from fission yeast and the human GNL3L are required for growth and play a role in processing of nucleolar pre-rRNA.

Authors:  Xianming Du; Malireddi R K Subba Rao; Xue Qin Chen; Wei Wu; Sundarasamy Mahalingam; David Balasundaram
Journal:  Mol Biol Cell       Date:  2005-10-26       Impact factor: 4.138

7.  Loc1p is required for efficient assembly and nuclear export of the 60S ribosomal subunit.

Authors:  Carl R Urbinati; Graydon B Gonsalvez; John P Aris; Roy M Long
Journal:  Mol Genet Genomics       Date:  2006-07-27       Impact factor: 3.291

8.  Biogenesis of yeast telomerase depends on the importin mtr10.

Authors:  Francisco Ferrezuelo; Barbara Steiner; Martí Aldea; Bruce Futcher
Journal:  Mol Cell Biol       Date:  2002-09       Impact factor: 4.272

9.  Kap120 functions as a nuclear import receptor for ribosome assembly factor Rpf1 in yeast.

Authors:  Stefanie Caesar; Markus Greiner; Gabriel Schlenstedt
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

10.  Structural similarity in the absence of sequence homology of the messenger RNA export factors Mtr2 and p15.

Authors:  Sébastien Fribourg; Elena Conti
Journal:  EMBO Rep       Date:  2003-07       Impact factor: 8.807

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