Literature DB >> 15150343

A minimalist glutamyl-tRNA synthetase dedicated to aminoacylation of the tRNAAsp QUC anticodon.

Mickaël Blaise1, Hubert Dominique Becker, Gérard Keith, Christian Cambillau, Jacques Lapointe, Richard Giegé, Daniel Kern.   

Abstract

Escherichia coli encodes YadB, a protein displaying 34% identity with the catalytic core of glutamyl-tRNA synthetase but lacking the anticodon-binding domain. We show that YadB is a tRNA modifying enzyme that evidently glutamylates the queuosine residue, a modified nucleoside at the wobble position of the tRNA(Asp) QUC anticodon. This conclusion is supported by a variety of biochemical data and by the inability of the enzyme to glutamylate tRNA(Asp) isolated from an E.coli tRNA-guanosine transglycosylase minus strain deprived of the capacity to exchange guanosine 34 with queuosine. Structural mimicry between the tRNA(Asp) anticodon stem and the tRNA(Glu) amino acid acceptor stem in prokaryotes encoding YadB proteins indicates that the function of these tRNA modifying enzymes, which we rename glutamyl-Q tRNA(Asp) synthetases, is conserved among prokaryotes.

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Year:  2004        PMID: 15150343      PMCID: PMC419609          DOI: 10.1093/nar/gkh608

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

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9.  An aminoacyl-tRNA synthetase-like protein encoded by the Escherichia coli yadB gene glutamylates specifically tRNAAsp.

Authors:  Daniel Y Dubois; Mickaël Blaise; Hubert D Becker; Valérie Campanacci; Gérard Keith; Richard Giegé; Christian Cambillau; Jacques Lapointe; Daniel Kern
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10.  Three-dimensional structure of hyper-modified nucleoside Q located in the wobbling position of tRNA.

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  15 in total

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8.  Fusion with anticodon binding domain of GluRS is not sufficient to alter the substrate specificity of a chimeric Glu-Q-RS.

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9.  Molecular dynamics simulations of human tRNA Lys,3 UUU: the role of modified bases in mRNA recognition.

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