Literature DB >> 7739675

Developmental regulation of RNA editing and polyadenylation in four life cycle stages of Trypanosoma congolense.

L K Read1, K A Stankey, W R Fish, A M Muthiani, K Stuart.   

Abstract

The accumulation of many edited mRNAs is developmentally regulated in a transcript-specific fashion in Trypanosoma brucei. In addition, these transcripts are frequently present in two size classes which differ substantially in the lengths of their poly(A) tails, and poly(A) tail length is also developmentally regulated. Previously, these phenomena have only been studied in the mammalian bloodstream and insect procyclic forms (BF and PF, respectively) of T. brucei. In this paper, we examine developmental regulation of edited RNA abundance and poly(A) tail length of 3 mitochondrially encoded RNAs in mammalian BF and 3 insect stages (PF, epimastigotes, and metacyclics) of T. congolense. T. congolense BF and PF are similar, but not identical, to these stages of T. brucei with regard to edited RNA accumulation and poly(A) tail length. At the level of edited RNA, both epimastigotes and metacyclic stage parasites appear to be pre-adapted for the respiratory mechanisms of BF but not yet down-regulated from the cytochrome-based respiration of PF since edited RNAs encoding NADH dehydrogenase components are up-regulated and edited CYb RNA is abundant in these stages. Poly(A) tail lengths of mitochondrial mRNAs appear to be regulated independently of edited RNA abundance. These results indicate that multiple mechanisms for regulation of mitochondrial gene expression are active throughout the trypanosome life cycle.

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Year:  1994        PMID: 7739675     DOI: 10.1016/0166-6851(94)90174-0

Source DB:  PubMed          Journal:  Mol Biochem Parasitol        ISSN: 0166-6851            Impact factor:   1.759


  20 in total

1.  Processing of polycistronic guide RNAs is associated with RNA editing complexes in Trypanosoma brucei.

Authors:  J Grams; M T McManus; S L Hajduk
Journal:  EMBO J       Date:  2000-10-16       Impact factor: 11.598

Review 2.  Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates.

Authors:  Julius Lukes; Hassan Hashimi; Alena Zíková
Journal:  Curr Genet       Date:  2005-11-04       Impact factor: 3.886

3.  RBP16 is a multifunctional gene regulatory protein involved in editing and stabilization of specific mitochondrial mRNAs in Trypanosoma brucei.

Authors:  Michel Pelletier; Laurie K Read
Journal:  RNA       Date:  2003-04       Impact factor: 4.942

4.  Targeted depletion of a mitochondrial nucleotidyltransferase suggests the presence of multiple enzymes that polymerize mRNA 3' tails in Trypanosoma brucei mitochondria.

Authors:  Chia-Ying Kao; Laurie K Read
Journal:  Mol Biochem Parasitol       Date:  2007-04-27       Impact factor: 1.759

5.  Opposing effects of polyadenylation on the stability of edited and unedited mitochondrial RNAs in Trypanosoma brucei.

Authors:  Chia-Ying Kao; Laurie K Read
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

Review 6.  High throughput sequencing revolution reveals conserved fundamentals of U-indel editing.

Authors:  Sara L Zimmer; Rachel M Simpson; Laurie K Read
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-06-11       Impact factor: 9.957

7.  UTP-dependent turnover of Trypanosoma brucei mitochondrial mRNA requires UTP polymerization and involves the RET1 TUTase.

Authors:  Christopher M Ryan; Laurie K Read
Journal:  RNA       Date:  2005-04-05       Impact factor: 4.942

8.  3' adenylation determines mRNA abundance and monitors completion of RNA editing in T. brucei mitochondria.

Authors:  Ronald D Etheridge; Inna Aphasizheva; Paul D Gershon; Ruslan Aphasizhev
Journal:  EMBO J       Date:  2008-05-08       Impact factor: 11.598

Review 9.  The mechanism of U insertion/deletion RNA editing in kinetoplastid mitochondria.

Authors:  J D Alfonzo; O Thiemann; L Simpson
Journal:  Nucleic Acids Res       Date:  1997-10-01       Impact factor: 16.971

10.  Guide RNA-binding complex from mitochondria of trypanosomatids.

Authors:  James Weng; Inna Aphasizheva; Ronald D Etheridge; Lan Huang; Xiaorong Wang; Arnold M Falick; Ruslan Aphasizhev
Journal:  Mol Cell       Date:  2008-10-24       Impact factor: 17.970

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