Literature DB >> 15123423

Loop relaxation, a mechanism that explains the reduced specificity of rabbit 20alpha-hydroxysteroid dehydrogenase, a member of the aldo-keto reductase superfamily.

Jean-François Couture1, Pierre Legrand, Line Cantin, Fernand Labrie, Van Luu-The, Rock Breton.   

Abstract

The aldo-keto reductase rabbit 20alpha-hydroxysteroid dehydrogenase (rb20alpha-HSD; AKR1C5) is less selective than other HSDs, since it exerts its activity both on androgens (C19 steroids) and progestins (C21 steroids). In order to identify the molecular determinants responsible for this reduced selectivity, binary (NADPH) and ternary (NADP(+)/testosterone) complex structures were solved to 1.32A and 2.08A resolution, respectively. Inspection of the cofactor-binding cavity led to the identification of a new interaction between side-chains of residues His222 and Lys270, which cover the central phosphate chain of the cofactor, reminiscent of the "safety-belt" found in other aldo-keto reductases. Testosterone is stabilized by a phenol/benzene tunnel composed of side-chains of numerous residues, among which Phe54, which forces the steroid to take up an orientation markedly contrasting with that found in HSD ternary complexes reported. Combining structural, site-directed mutagenesis, kinetic and fluorescence titration studies, we found that the selectivity of rb20alpha-HSD is mediated by (i) the relaxation of loop B (residues 223-230), partly controlled by the nature of residue 230, (ii) the nature of the residue found at position 54, and (iii) the residues found in the C-terminal tail of the protein especially the side-chain of the amino acid 306.

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Year:  2004        PMID: 15123423     DOI: 10.1016/j.jmb.2004.03.035

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  8 in total

1.  Isoform-specific targeting and interaction domains in human nicotinamide mononucleotide adenylyltransferases.

Authors:  Corinna Lau; Christian Dölle; Toni I Gossmann; Line Agledal; Marc Niere; Mathias Ziegler
Journal:  J Biol Chem       Date:  2010-04-13       Impact factor: 5.157

2.  Crystallization and preliminary X-ray diffraction analysis of mouse 3(17)alpha-hydroxysteroid dehydrogenase.

Authors:  Ossama El-Kabbani; Syuhei Ishikura; Armin Wagner; Clemens Schulze-Briese; Akira Hara
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-06-23

3.  Comparison of crystal structures of human type 3 3alpha-hydroxysteroid dehydrogenase reveals an "induced-fit" mechanism and a conserved basic motif involved in the binding of androgen.

Authors:  Jean-François Couture; Karine Pereira de Jésus-Tran; Anne-Marie Roy; Line Cantin; Pierre-Luc Côté; Pierre Legrand; Van Luu-The; Fernand Labrie; Rock Breton
Journal:  Protein Sci       Date:  2005-06       Impact factor: 6.725

4.  Identification and functional characterization of sorbitol-6-phosphate dehydrogenase protein from rice and structural elucidation by in silico approach.

Authors:  Rajbala Yadav; Ramasare Prasad
Journal:  Planta       Date:  2014-05-11       Impact factor: 4.116

5.  Crystal structure of human liver Delta4-3-ketosteroid 5beta-reductase (AKR1D1) and implications for substrate binding and catalysis.

Authors:  Luigi Di Costanzo; Jason E Drury; Trevor M Penning; David W Christianson
Journal:  J Biol Chem       Date:  2008-04-11       Impact factor: 5.157

6.  Acceleration of an aldo-keto reductase by minimal loop engineering.

Authors:  C Krump; M Vogl; L Brecker; B Nidetzky; R Kratzer
Journal:  Protein Eng Des Sel       Date:  2014-07       Impact factor: 1.650

7.  Reductive enzymatic dynamic kinetic resolution affording 115 g/L (S)-2-phenylpropanol.

Authors:  Christian Rapp; Simone Pival-Marko; Erika Tassano; Bernd Nidetzky; Regina Kratzer
Journal:  BMC Biotechnol       Date:  2021-10-11       Impact factor: 2.563

Review 8.  Gates of enzymes.

Authors:  Artur Gora; Jan Brezovsky; Jiri Damborsky
Journal:  Chem Rev       Date:  2013-04-25       Impact factor: 60.622

  8 in total

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