Literature DB >> 15123244

ADP-specific sensors enable universal assay of protein kinase activity.

Jayaram Srinivasan1, Sharon T Cload, Nobuko Hamaguchi, Jeffrey Kurz, Sara Keene, Markus Kurz, Ryan M Boomer, Jill Blanchard, David Epstein, Charles Wilson, John L Diener.   

Abstract

Two molecular sensors that specifically recognize ADP in a background of over 100-fold molar excess of ATP are described. These sensors are nucleic-acid based and comprise a general method for monitoring protein kinase activity. The ADP-aptamer scintillation proximity assay is configured in a single-step, homogeneous format while the allosteric ribozyme (RiboReporter) sensor generates a fluorescent signal upon ADP-dependent ribozyme self-cleavage. Both systems perform well when configured for high-throughput screening and have been used to rediscover a known protein kinase inhibitor in a high-throughput screening format.

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Year:  2004        PMID: 15123244     DOI: 10.1016/j.chembiol.2004.03.014

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  19 in total

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Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

Review 2.  Nucleic acid-based fluorescent probes and their analytical potential.

Authors:  Bernard Juskowiak
Journal:  Anal Bioanal Chem       Date:  2010-10-29       Impact factor: 4.142

3.  The expanding view of RNA and DNA function.

Authors:  Ronald R Breaker; Gerald F Joyce
Journal:  Chem Biol       Date:  2014-09-18

4.  Using Spinach-based sensors for fluorescence imaging of intracellular metabolites and proteins in living bacteria.

Authors:  Rita L Strack; Wenjiao Song; Samie R Jaffrey
Journal:  Nat Protoc       Date:  2013-12-19       Impact factor: 13.491

Review 5.  Aptamers for allosteric regulation.

Authors:  Jan L Vinkenborg; Nora Karnowski; Michael Famulok
Journal:  Nat Chem Biol       Date:  2011-07-18       Impact factor: 15.040

Review 6.  New approaches for sensing metabolites and proteins in live cells using RNA.

Authors:  Rita L Strack; Samie R Jaffrey
Journal:  Curr Opin Chem Biol       Date:  2013-06-06       Impact factor: 8.822

Review 7.  Fluorescent DNA-based enzyme sensors.

Authors:  Nan Dai; Eric T Kool
Journal:  Chem Soc Rev       Date:  2011-02-02       Impact factor: 54.564

8.  A fluorescent, reagentless biosensor for ADP based on tetramethylrhodamine-labeled ParM.

Authors:  Simone Kunzelmann; Martin R Webb
Journal:  ACS Chem Biol       Date:  2010-04-16       Impact factor: 5.100

9.  Assay for glucosamine 6-phosphate using a ligand-activated ribozyme with fluorescence resonance energy transfer or CE-laser-induced fluorescence detection.

Authors:  Jennifer R W Furchak; Peilin Yang; Colin Jennings; Nils G Walter; Robert T Kennedy
Journal:  Anal Chem       Date:  2008-10-09       Impact factor: 6.986

10.  A biosensor for fluorescent determination of ADP with high time resolution.

Authors:  Simone Kunzelmann; Martin R Webb
Journal:  J Biol Chem       Date:  2009-09-29       Impact factor: 5.157

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