Literature DB >> 15115797

A novel replicating circular DNAzyme.

Fei Chen1, Ruijian Wang, Zhe Li, Bin Liu, Xiaoping Wang, Yanhong Sun, Dongyun Hao, Jin Zhang.   

Abstract

10-23 DNAzyme has the potential to suppress gene expressions through sequence-specific mRNA cleavage. However, the dependence on exogenous delivery limits its applications. The objective of this work is to establish a replicating DNAzyme in bacteria using a single-stranded DNA vector. By cloning the 10-23 DNAzyme into the M13mp18 vector, we constructed two circular DNAzymes, C-Dz7 and C-Dz482, targeting the beta-lactamase mRNA. These circular DNAzymes showed in vitro catalytic efficiencies (kcat/K(M)) of 7.82 x 10(6) and 1.36 x 10(7) M(-1) x min(-1), respectively. Their dependence on divalent metal ions is similar to that found with linear 10-23 DNAzyme. Importantly, the circular DNAzymes were not only capable of replicating in bacteria but also exhibited high activities in inhibiting beta-lactamase and bacterial growth. This study thus provides a novel strategy to produce replicating DNAzymes which may find widespread applications.

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Year:  2004        PMID: 15115797      PMCID: PMC419442          DOI: 10.1093/nar/gkh547

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  30 in total

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Authors:  E Finkel
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4.  A circular RNA-DNA enzyme obtained by in vitro selection.

Authors:  Xiang-duo Kong; Shi-zhen Zhu; Xiao-jun Gou; Xiao-ping Wang; Hong-ying Zhang; Jin Zhang
Journal:  Biochem Biophys Res Commun       Date:  2002-04-12       Impact factor: 3.575

Review 5.  Differences among mechanisms of ribozyme-catalyzed reactions.

Authors:  M Warashina; Y Takagi; W J Stec; K Taira
Journal:  Curr Opin Biotechnol       Date:  2000-08       Impact factor: 9.740

6.  Target site selection for an RNA-cleaving catalytic DNA.

Authors:  M J Cairns; T M Hopkins; C Witherington; L Wang; L Q Sun
Journal:  Nat Biotechnol       Date:  1999-05       Impact factor: 54.908

7.  Suppression of smooth muscle cell proliferation by a c-myc RNA-cleaving deoxyribozyme.

Authors:  L Q Sun; M J Cairns; W L Gerlach; C Witherington; L Wang; A King
Journal:  J Biol Chem       Date:  1999-06-11       Impact factor: 5.157

8.  A general purpose RNA-cleaving DNA enzyme.

Authors:  S W Santoro; G F Joyce
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-29       Impact factor: 11.205

9.  Cellular uptake, distribution, and stability of 10-23 deoxyribozymes.

Authors:  Crispin R Dass; Edward G Saravolac; Yang Li; Lun-Quan Sun
Journal:  Antisense Nucleic Acid Drug Dev       Date:  2002-10

10.  A continuous kinetic assay for RNA-cleaving deoxyribozymes, exploiting ethidium bromide as an extrinsic fluorescent probe.

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Journal:  Nucleic Acids Res       Date:  2002-10-15       Impact factor: 16.971

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  3 in total

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Review 2.  RNA-cleaving DNAzymes as a diagnostic and therapeutic agent against antimicrobial resistant bacteria.

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Journal:  Curr Genet       Date:  2021-09-09       Impact factor: 3.886

Review 3.  In vitro selection, characterization, and application of deoxyribozymes that cleave RNA.

Authors:  Scott K Silverman
Journal:  Nucleic Acids Res       Date:  2005-11-11       Impact factor: 16.971

  3 in total

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