Literature DB >> 15103135

Mycobacterium tuberculosis RmlC epimerase (Rv3465): a promising drug-target structure in the rhamnose pathway.

Katherine A Kantardjieff1, Chang Yub Kim, Cleo Naranjo, Geoffry S Waldo, Timothy Lekin, Brent W Segelke, Adam Zemla, Min S Park, Thomas C Terwilliger, Bernhard Rupp.   

Abstract

The Mycobacterium tuberculosis rmlC gene encodes dTDP-4-keto-6-deoxyglucose epimerase, the third enzyme in the M. tuberculosis dTDP-L-rhamnose pathway which is essential for mycobacterial cell-wall synthesis. Because it is structurally unique, highly substrate-specific and does not require a cofactor, RmlC is considered to be the most promising drug target in the pathway, and the M. tuberculosis rmlC gene was selected in the initial round of TB Structural Genomics Consortium targets for structure determination. The 1.7 A native structure determined by the consortium facilities is reported and implications for in silico screening of ligands for structure-guided drug design are discussed.

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Year:  2004        PMID: 15103135     DOI: 10.1107/S0907444904005323

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  13 in total

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Journal:  Nat Prod Rep       Date:  2012-06-12       Impact factor: 13.423

Review 2.  The Mycobacterial Cell Wall--Peptidoglycan and Arabinogalactan.

Authors:  Luke J Alderwick; James Harrison; Georgina S Lloyd; Helen L Birch
Journal:  Cold Spring Harb Perspect Med       Date:  2015-03-27       Impact factor: 6.915

3.  Computational evaluation of phytocompounds for combating drug resistant tuberculosis by multi-targeted therapy.

Authors:  Sudharsana Sundarrajan; Sajitha Lulu; Mohanapriya Arumugam
Journal:  J Mol Model       Date:  2015-09-01       Impact factor: 1.810

4.  RmlC, a C3' and C5' carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation.

Authors:  Changjiang Dong; Louise L Major; Velupillai Srikannathasan; James C Errey; Marie-France Giraud; Joseph S Lam; Michael Graninger; Paul Messner; Michael R McNeil; Robert A Field; Chris Whitfield; James H Naismith
Journal:  J Mol Biol       Date:  2006-09-29       Impact factor: 5.469

5.  Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.

Authors:  Alice R Cross; Sumita Roy; Mirella Vivoli Vega; Martin Rejzek; Sergey A Nepogodiev; Matthew Cliff; Debbie Salmon; Michail N Isupov; Robert A Field; Joann L Prior; Nicholas J Harmer
Journal:  J Biol Chem       Date:  2022-04-06       Impact factor: 5.486

6.  AS2TS system for protein structure modeling and analysis.

Authors:  A Zemla; C Ecale Zhou; T Slezak; T Kuczmarski; D Rama; C Torres; D Sawicka; D Barsky
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

7.  Differential gene repertoire in Mycobacterium ulcerans identifies candidate genes for patho-adaptation.

Authors:  Michael Käser; Gerd Pluschke
Journal:  PLoS Negl Trop Dis       Date:  2008-12-23

8.  Protein similarity networks reveal relationships among sequence, structure, and function within the Cupin superfamily.

Authors:  Richard Uberto; Ellen W Moomaw
Journal:  PLoS One       Date:  2013-09-06       Impact factor: 3.240

9.  Streptococcal dTDP-L-rhamnose biosynthesis enzymes: functional characterization and lead compound identification.

Authors:  Samantha L van der Beek; Azul Zorzoli; Ebru Çanak; Robert N Chapman; Kieron Lucas; Benjamin H Meyer; Dimitrios Evangelopoulos; Luiz Pedro S de Carvalho; Geert-Jan Boons; Helge C Dorfmueller; Nina M van Sorge
Journal:  Mol Microbiol       Date:  2019-01-31       Impact factor: 3.501

10.  The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery.

Authors:  Roz Laing; Taisei Kikuchi; Axel Martinelli; Isheng J Tsai; Robin N Beech; Elizabeth Redman; Nancy Holroyd; David J Bartley; Helen Beasley; Collette Britton; David Curran; Eileen Devaney; Aude Gilabert; Martin Hunt; Frank Jackson; Stephanie L Johnston; Ivan Kryukov; Keyu Li; Alison A Morrison; Adam J Reid; Neil Sargison; Gary I Saunders; James D Wasmuth; Adrian Wolstenholme; Matthew Berriman; John S Gilleard; James A Cotton
Journal:  Genome Biol       Date:  2013-08-28       Impact factor: 13.583

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