Literature DB >> 15096613

Ancestral hemoglobins in Archaea.

Tracey Allen K Freitas1, Shaobin Hou, Elhadji M Dioum, Jennifer A Saito, James Newhouse, Gonzalo Gonzalez, Marie-Alda Gilles-Gonzalez, Maqsudul Alam.   

Abstract

Hemoglobins are ubiquitous in Eukarya and Bacteria but, until now, have not been found in Archaea. A phylogenetic analysis of the recently revealed microbial family of globin-coupled heme-based sensors suggests that these sensors descended from an ancient globin-only progenitor, or a protoglobin (Pgb). Here, we report the discovery and characterization of two Pgbs from the Archaea: ApPgb from the obligately aerobic hyperthermophile Aeropyrum pernix, and MaPgb from the strictly anaerobic methanogen Methanosarcina acetivorans. Both ApPgb and MaPgb bind molecular oxygen, nitric oxide, and carbon monoxide by means of a heme moiety that is coordinated to the protein through the F8 histidine (histidine 120). We postulate that these archaeal globins are the ancestors of contemporary hemoglobins.

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Year:  2004        PMID: 15096613      PMCID: PMC404104          DOI: 10.1073/pnas.0308657101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Phosphodiesterase A1, a regulator of cellulose synthesis in Acetobacter xylinum, is a heme-based sensor.

Authors:  A L Chang; J R Tuckerman; G Gonzalez; R Mayer; H Weinhouse; G Volman; D Amikam; M Benziman; M A Gilles-Gonzalez
Journal:  Biochemistry       Date:  2001-03-27       Impact factor: 3.162

Review 2.  Truncated hemoglobins: a new family of hemoglobins widely distributed in bacteria, unicellular eukaryotes, and plants.

Authors:  Jonathan B Wittenberg; Martino Bolognesi; Beatrice A Wittenberg; Michel Guertin
Journal:  J Biol Chem       Date:  2001-11-05       Impact factor: 5.157

3.  Globin-coupled sensors: a class of heme-containing sensors in Archaea and Bacteria.

Authors:  S Hou; T Freitas; R W Larsen; M Piatibratov; V Sivozhelezov; A Yamamoto; E A Meleshkevitch; M Zimmer; G W Ordal; M Alam
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

4.  A novel two-over-two alpha-helical sandwich fold is characteristic of the truncated hemoglobin family.

Authors:  A Pesce; M Couture; S Dewilde; M Guertin; K Yamauchi; P Ascenzi; L Moens; M Bolognesi
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

5.  The haemoglobins of Ascaris lumbricoides.

Authors:  H E DAVENPORT
Journal:  Proc R Soc Lond B Biol Sci       Date:  1949-06-23

6.  Mycobacterium tuberculosis hemoglobin N displays a protein tunnel suited for O2 diffusion to the heme.

Authors:  M Milani; A Pesce; Y Ouellet; P Ascenzi; M Guertin; M Bolognesi
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

7.  Expression and fast-flow purification of a polyhistidine-tagged myoglobin-like aerotaxis transducer.

Authors:  M Piatibratov; S Hou; A Brooun; J Yang; H Chen; M Alam
Journal:  Biochim Biophys Acta       Date:  2000-12-15

8.  Truncated hemoglobin HbN protects Mycobacterium bovis from nitric oxide.

Authors:  Hugues Ouellet; Yannick Ouellet; Christian Richard; Marie Labarre; Beatrice Wittenberg; Jonathan Wittenberg; Michel Guertin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

9.  Ligand binding in the ferric and ferrous states of Paramecium hemoglobin.

Authors:  T K Das; R E Weber; S Dewilde; J B Wittenberg; B A Wittenberg; K Yamauchi; M L Van Hauwaert; L Moens; D L Rousseau
Journal:  Biochemistry       Date:  2000-11-21       Impact factor: 3.162

10.  Myoglobin: A scavenger of bioactive NO.

Authors:  U Flögel; M W Merx; A Godecke; U K Decking; J Schrader
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

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  28 in total

1.  Evolution of structural shape in bacterial globin-related proteins.

Authors:  Lorraine Marsh
Journal:  J Mol Evol       Date:  2006-04-11       Impact factor: 2.395

2.  Archaeal protoglobin structure indicates new ligand diffusion paths and modulation of haem-reactivity.

Authors:  Marco Nardini; Alessandra Pesce; Liesbet Thijs; Jennifer A Saito; Sylvia Dewilde; Maqsudul Alam; Paolo Ascenzi; Massimiliano Coletta; Chiara Ciaccio; Luc Moens; Martino Bolognesi
Journal:  EMBO Rep       Date:  2008-01-11       Impact factor: 8.807

3.  Three globin lineages belonging to two structural classes in genomes from the three kingdoms of life.

Authors:  Serge N Vinogradov; David Hoogewijs; Xavier Bailly; Raúl Arredondo-Peter; Michel Guertin; Julian Gough; Sylvia Dewilde; Luc Moens; Jacques R Vanfleteren
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-01       Impact factor: 11.205

4.  Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park.

Authors:  Mark A Kozubal; Margaret Romine; Ryan deM Jennings; Zack J Jay; Susannah G Tringe; Doug B Rusch; Jacob P Beam; Lee Ann McCue; William P Inskeep
Journal:  ISME J       Date:  2012-11-15       Impact factor: 10.302

5.  Nitrite reductase activity of nonsymbiotic hemoglobins from Arabidopsis thaliana.

Authors:  Mauro Tiso; Jesús Tejero; Claire Kenney; Sheila Frizzell; Mark T Gladwin
Journal:  Biochemistry       Date:  2012-06-20       Impact factor: 3.162

Review 6.  The role of globins in cardiovascular physiology.

Authors:  T C Stevenson Keller; Christophe Lechauve; Alexander S Keller; Steven Brooks; Mitchell J Weiss; Linda Columbus; Hans Ackerman; Miriam M Cortese-Krott; Brant E Isakson
Journal:  Physiol Rev       Date:  2021-09-06       Impact factor: 37.312

7.  Spectroscopic characterization of a truncated hemoglobin from the nitrogen-fixing bacterium Herbaspirillum seropedicae.

Authors:  Guilherme Razzera; Javier Vernal; Debora Baruh; Viviane I Serpa; Carolina Tavares; Flávio Lara; Emanuel M Souza; Fábio O Pedrosa; Fábio C L Almeida; Hernán Terenzi; Ana Paula Valente
Journal:  J Biol Inorg Chem       Date:  2008-06-12       Impact factor: 3.358

Review 8.  Heme-based globin-coupled oxygen sensors: linking oxygen binding to functional regulation of diguanylate cyclase, histidine kinase, and methyl-accepting chemotaxis.

Authors:  Markéta Martínková; Kenichi Kitanishi; Toru Shimizu
Journal:  J Biol Chem       Date:  2013-08-08       Impact factor: 5.157

9.  Molecular cloning and sequencing of hemoglobin-beta gene of channel catfish, Ictalurus punctatus Rafinesque.

Authors:  Hung-Yueh Yeh; Craig A Shoemaker; Phillip H Klesius
Journal:  Fish Physiol Biochem       Date:  2006-03       Impact factor: 2.794

10.  Comparative genomics of neuroglobin reveals its early origins.

Authors:  Jasmin Dröge; Amit Pande; Ella W Englander; Wojciech Makałowski
Journal:  PLoS One       Date:  2012-10-25       Impact factor: 3.240

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