Literature DB >> 11087382

Ligand binding in the ferric and ferrous states of Paramecium hemoglobin.

T K Das1, R E Weber, S Dewilde, J B Wittenberg, B A Wittenberg, K Yamauchi, M L Van Hauwaert, L Moens, D L Rousseau.   

Abstract

The unicellular protozoan Paramecium caudatum contains a monomeric hemoglobin (Hb) that has only 116 amino acid residues. This Hb shares the simultaneous presence of a distal E7 glutamine and a B10 tyrosine with several invertebrate Hbs. In the study presented here, we have used ligand binding kinetics and resonance Raman spectroscopy to characterize the effect of the distal pocket residues of Paramecium Hb in stabilizing the heme-bound ligands. In the ferric state, the high-spin to low-spin (aquo-hydroxy) transition takes place with a pK(a) of approximately 9.0. The oxygen affinity (P(50) = 0.45 Torr) is similar to that of myoglobin. The oxygen on- and off-rates are also similar to those of sperm whale myoglobin. Resonance Raman data suggest hydrogen bonding stabilization of bound oxygen, evidenced by a relatively low frequency of Fe-OO stretching (563 cm(-1)). We propose that the oxy complex is an equilibrium mixture of a hydrogen-bonded closed structure and an open structure. Oxygen will dissociate preferentially from the open structure, and therefore, the fraction of open structure population controls the rate of oxygen dissociation. In the CO complex, the Fe-CO stretching frequency at 493 cm(-1) suggests an open heme pocket, which is consistent with the higher on- and off-rates for CO relative to those in myoglobin. A high rate of ligand binding is also consistent with the observation of an Fe-histidine stretching frequency at 220 cm(-1), indicating the absence of significant proximal strain. We postulate that the function of Paramecium Hb is to supply oxygen for cellular oxidative processes.

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Year:  2000        PMID: 11087382     DOI: 10.1021/bi001681d

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

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2.  A phylogenetic and structural analysis of truncated hemoglobins.

Authors:  David A Vuletich; Juliette T J Lecomte
Journal:  J Mol Evol       Date:  2006-02-10       Impact factor: 2.395

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Journal:  Biochemistry       Date:  2006-05-16       Impact factor: 3.162

4.  A quantitative model for oxygen uptake and release in a family of hemeproteins.

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Journal:  Bioinformatics       Date:  2016-02-15       Impact factor: 6.937

5.  Simultaneous observation of the O---O and Fe---O2 stretching modes in oxyhemoglobins.

Authors:  T K Das; M Couture; Y Ouellet; M Guertin; D L Rousseau
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-16       Impact factor: 11.205

6.  Characterization of unusual truncated hemoglobins of Chlamydomonas reinhardtii suggests specialized functions.

Authors:  Dennis Huwald; Peer Schrapers; Ramona Kositzki; Michael Haumann; Anja Hemschemeier
Journal:  Planta       Date:  2015-04-19       Impact factor: 4.116

7.  A hemoglobin from plants homologous to truncated hemoglobins of microorganisms.

Authors:  R A Watts; P W Hunt; A N Hvitved; M S Hargrove; W J Peacock; E S Dennis
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-28       Impact factor: 11.205

8.  Identification and functional and spectral characterization of a globin-coupled histidine kinase from Anaeromyxobacter sp. Fw109-5.

Authors:  Kenichi Kitanishi; Kazuo Kobayashi; Takeshi Uchida; Koichiro Ishimori; Jotaro Igarashi; Toru Shimizu
Journal:  J Biol Chem       Date:  2011-08-18       Impact factor: 5.157

9.  Mycobacterium tuberculosis hemoglobin N displays a protein tunnel suited for O2 diffusion to the heme.

Authors:  M Milani; A Pesce; Y Ouellet; P Ascenzi; M Guertin; M Bolognesi
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

10.  Globin-like proteins in Caenorhabditis elegans: in vivo localization, ligand binding and structural properties.

Authors:  Eva Geuens; David Hoogewijs; Marco Nardini; Evi Vinck; Alessandra Pesce; Laurent Kiger; Angela Fago; Lesley Tilleman; Sasha De Henau; Michael C Marden; Roy E Weber; Sabine Van Doorslaer; Jacques Vanfleteren; Luc Moens; Martino Bolognesi; Sylvia Dewilde
Journal:  BMC Biochem       Date:  2010-04-02       Impact factor: 4.059

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