Literature DB >> 15072998

Web-based kinetic modelling using JWS Online.

Brett G Olivier1, Jacky L Snoep.   

Abstract

UNLABELLED: JWS Online is a repository of kinetic models, describing biological systems, which can be interactively run and interrogated over the Internet. It is implemented using a client-server strategy where the clients, in the form of web browser based Java applets, act as a graphical interface to the model servers, which perform the required numerical computations. AVAILABILITY: The JWS Online website is publicly accessible at http://jjj.biochem.sun.ac.za/ with mirrors at http://www.jjj.bio.vu.nl/ and http://jjj.vbi.vt.edu/

Mesh：

Year:  2004        PMID： 15072998     DOI： 10.1093/bioinformatics/bth200

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  91 in total

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Review 4.  Computational modelling of the receptor-tyrosine-kinase-activated MAPK pathway.

Authors:  Richard J Orton; Oliver E Sturm; Vladislav Vyshemirsky; Muffy Calder; David R Gilbert; Walter Kolch
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Authors:  Michael Ederer; Ernst Dieter Gilles
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Review 6.  Cell-signalling dynamics in time and space.

Authors:  Boris N Kholodenko
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7.  Systems biology towards life in silico: mathematics of the control of living cells.

Authors:  Hans V Westerhoff; Alexey Kolodkin; Riaan Conradie; Stephen J Wilkinson; Frank J Bruggeman; Klaas Krab; Jan H van Schuppen; Hanna Hardin; Barbara M Bakker; Martijn J Moné; Katja N Rybakova; Marco Eijken; Hans J P van Leeuwen; Jacky L Snoep
Journal:  J Math Biol       Date:  2008-02-16       Impact factor: 2.259

8.  Web-based applications for building, managing and analysing kinetic models of biological systems.

Authors:  Dong-Yup Lee; Rajib Saha; Faraaz Noor Khan Yusufi; Wonjun Park; Iftekhar A Karimi
Journal:  Brief Bioinform       Date:  2008-09-19       Impact factor: 11.622

9.  Approaches to biosimulation of cellular processes.

Authors:  F J Bruggeman; H V Westerhoff
Journal:  J Biol Phys       Date:  2006-11-11       Impact factor: 1.365

10.  "Hot standards" for the thermoacidophilic archaeon Sulfolobus solfataricus.

Authors:  Melanie Zaparty; Dominik Esser; Susanne Gertig; Patrick Haferkamp; Theresa Kouril; Andrea Manica; Trong K Pham; Julia Reimann; Kerstin Schreiber; Pawel Sierocinski; Daniela Teichmann; Marleen van Wolferen; Mathias von Jan; Patricia Wieloch; Sonja V Albers; Arnold J M Driessen; Hans-Peter Klenk; Christa Schleper; Dietmar Schomburg; John van der Oost; Phillip C Wright; Bettina Siebers
Journal:  Extremophiles       Date:  2009-10-04       Impact factor: 2.395
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