Literature DB >> 15054676

Prokaryotic diversity in the Antarctic: the tip of the iceberg.

B J Tindall1.   

Abstract

In contrast to the rather limited diversity of plants and animals to be found in the Antarctic, the microbial diversity of this continent has been shown to be "surprisingly" diverse. Apparently barren soil and rock landscapes, as well as the numerous and diverse lakes found at the edges of the continent, harbor a range of prokaryotes which indicate that the extremely low temperatures which prevail seasonally are no obstacle to microbial colonization. Both direct cultivation methods and modern molecular genetic methods have contributed to our understanding of the range of organisms to be found. Cultivation based studies are often hampered by constraints inherent in the methods selected for the isolation of organisms. Molecular-based approaches do not suffer from the same cultivation-based biases, but other problems need to be taken into consideration. It has rarely been possible to combine both techniques in a single study, nor has it usually been possible to take the results and conclusions drawn from the study of one environment and apply this knowledge to a further series of experiments on the same environment. The Antarctic may be considered to be a geographically well isolated area to study. Comparison with other environments that may also be "isolated" from their surroundings (i.e., hot springs or highly saline lakes) allows parallels to be drawn. The conclusions drawn provide important insights into the way the Antarctic may have been colonized and the microbiota diversified. Much work still needs to be done beyond the simple task of making an inventory. The functioning of complex communities, such as mat systems, requires an understanding of the ecology of the systems, not only at the level of the whole system, but also the role of localized environments within that system. Perhaps these ecosystems have, in the absence of plant and animal communities, a role to play in the monitoring of polar climate change. The information available at present clearly indicates that the Antarctic is deserving of further study at the microbial level.

Mesh:

Year:  2004        PMID: 15054676     DOI: 10.1007/s00248-003-1050-7

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  75 in total

1.  Highly ordered vertical structure of Synechococcus populations within the one-millimeter-thick photic zone of a hot spring cyanobacterial mat.

Authors:  N B Ramsing; M J Ferris; D M Ward
Journal:  Appl Environ Microbiol       Date:  2000-03       Impact factor: 4.792

2.  Cultivatable microbial biodiversity: gnawing at the Gordian knot.

Authors:  B J Tindall; E Brambilla; M Steffen; R Neumann; R Pukall; R M Kroppenstedt; E Stackebrandt
Journal:  Environ Microbiol       Date:  2000-06       Impact factor: 5.491

3.  16S rRNA-targeted polymerase chain reaction and oligonucleotide hybridization to screen for Azoarcus spp., grass-associated diazotrophs.

Authors:  T Hurek; S Burggraf; C R Woese; B Reinhold-Hurek
Journal:  Appl Environ Microbiol       Date:  1993-11       Impact factor: 4.792

4.  16S rDNA diversity of cultured and uncultured prokaryotes of a mat sample from Lake Fryxell, McMurdo Dry Valleys, Antarctica.

Authors:  E Brambilla; H Hippe; A Hagelstein; B J Tindall; E Stackebrandt
Journal:  Extremophiles       Date:  2001-02       Impact factor: 2.395

5.  Flavobacterium frigidarium sp. nov., an aerobic, psychrophilic, xylanolytic and laminarinolytic bacterium from Antarctica.

Authors:  D R Humphry; A George; G W Black; S P Cummings
Journal:  Int J Syst Evol Microbiol       Date:  2001-07       Impact factor: 2.747

6.  Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species.

Authors:  V Farrelly; F A Rainey; E Stackebrandt
Journal:  Appl Environ Microbiol       Date:  1995-07       Impact factor: 4.792

7.  Psychrotrophic, lactic acid-producing bacteria from anoxic waters in Ace Lake, Antarctica; Carnobacterium funditum sp. nov. and Carnobacterium alterfunditum sp. nov.

Authors:  P D Franzmann; P Höpfl; N Weiss; B J Tindall
Journal:  Arch Microbiol       Date:  1991       Impact factor: 2.552

8.  Characterization of novel psychrophilic clostridia from an Antarctic microbial mat: description of Clostridium frigoris sp. nov., Clostridium lacusfryxellense sp. nov., Clostridium bowmanii sp. nov. and Clostridium psychrophilum sp. nov. and reclassification of Clostridium laramiense as Clostridium estertheticum subsp. laramiense subsp. nov.

Authors:  Stefan Spring; Birgit Merkhoffer; Norbert Weiss; Reiner M Kroppenstedt; Hans Hippe; Erko Stackebrandt
Journal:  Int J Syst Evol Microbiol       Date:  2003-07       Impact factor: 2.747

9.  Psychroflexus torquis gen. nov., sp. nov., a psychrophilic species from Antarctic sea ice, and reclassification of Flavobacterium gondwanense (Dobson et al. 1993) as Psychroflexus gondwanense gen. nov., comb. nov.

Authors:  J P Bowman; S A McCammon; T Lewis; J H Skerratt; J L Brown; D S Nichols; T A McMeekin
Journal:  Microbiology       Date:  1998-06       Impact factor: 2.777

10.  Kocuria polaris sp. nov., an orange-pigmented psychrophilic bacterium isolated from an Antarctic cyanobacterial mat sample.

Authors:  Gundlapally S N Reddy; Jogadhenu S S Prakash; Vadivel Prabahar; Genki I Matsumoto; Erko Stackebrandt; Sisinthy Shivaji
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747

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  20 in total

1.  Pattern of elemental release during the granite dissolution can be changed by aerobic heterotrophic bacterial strains isolated from Damma Glacier (central Alps) deglaciated granite sand.

Authors:  Aleš Lapanje; Celine Wimmersberger; Gerhard Furrer; Ivano Brunner; Beat Frey
Journal:  Microb Ecol       Date:  2011-11-22       Impact factor: 4.552

2.  Bacterial biodiversity from Roopkund Glacier, Himalayan mountain ranges, India.

Authors:  Suman Pradhan; T N R Srinivas; Pavan Kumar Pindi; K Hara Kishore; Z Begum; Pawan Kumar Singh; Ashish Kumar Singh; M S Pratibha; Arun K Yasala; G S N Reddy; S Shivaji
Journal:  Extremophiles       Date:  2010-05-28       Impact factor: 2.395

3.  Chitinase genes in lake sediments of Ardley Island, Antarctica.

Authors:  Xiang Xiao; Xuebin Yin; Jian Lin; Liguang Sun; Ziyong You; Peng Wang; Fengping Wang
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

4.  Towards a conceptual and operational union of bacterial systematics, ecology, and evolution.

Authors:  Frederick M Cohan
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-11-29       Impact factor: 6.237

5.  Cold-active chemoorganotrophic bacteria from permanently ice-covered Lake Hoare, McMurdo Dry Valleys, Antarctica.

Authors:  Kate M Clocksin; Deborah O Jung; Michael T Madigan
Journal:  Appl Environ Microbiol       Date:  2007-03-16       Impact factor: 4.792

6.  The biodiversity and ecology of Antarctic lakes: models for evolution.

Authors:  Johanna Laybourn-Parry; David A Pearce
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2007-12-29       Impact factor: 6.237

7.  Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?

Authors:  Chun Wie Chong; Yuh Shan Goh; Peter Convey; David Pearce; Irene Kit Ping Tan
Journal:  Extremophiles       Date:  2013-06-29       Impact factor: 2.395

8.  Antarctic strict anaerobic microbiota from Deschampsia antarctica vascular plants rhizosphere reveals high ecology and biotechnology relevance.

Authors:  Rafael José Marques Peixoto; Karla Rodrigues Miranda; Leandro Araujo Lobo; Alessandra Granato; Pedro de Carvalho Maalouf; Hugo Emiliano de Jesus; Caio T C C Rachid; Saulo Roni Moraes; Henrique Fragoso Dos Santos; Raquel Silva Peixoto; Alexandre Soares Rosado; Regina Maria Cavalcanti Pilotto Domingues
Journal:  Extremophiles       Date:  2016-10-05       Impact factor: 2.395

9.  Characterization of culturable Paenibacillus spp. from the snow surface on the high Antarctic Plateau (DOME C) and their dissemination in the Concordia research station.

Authors:  Rob Van Houdt; Marie Deghorain; Marjorie Vermeersch; Ann Provoost; Angelina Lo Giudice; Natalie Leys; David Perez-Morga; Laurence Van Melderen; Luigi Michaud
Journal:  Extremophiles       Date:  2013-04-16       Impact factor: 2.395

10.  Molecular characterization of Antarctic actinobacteria and screening for antimicrobial metabolite production.

Authors:  Learn-Han Lee; Yoke-Kqueen Cheah; Shiran Mohd Sidik; Nurul-Syakima Ab Mutalib; Yi-Li Tang; Hai-Peng Lin; Kui Hong
Journal:  World J Microbiol Biotechnol       Date:  2012-02-15       Impact factor: 3.312

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