Literature DB >> 15031717

The Snf1 kinase controls glucose repression in yeast by modulating interactions between the Mig1 repressor and the Cyc8-Tup1 co-repressor.

Manolis Papamichos-Chronakis1, Thomas Gligoris, Dimitris Tzamarias.   

Abstract

Among lower eukaryotes, glucose repression is a conserved, widely spread mechanism regulating carbon catabolism. The yeast Snf1 kinase, the Mig1 DNA-binding repressor and the Mig1-interacting co-repressor complex Cyc8(Ssn6)-Tup1 are central components of this pathway. Previous experiments suggested that cytoplasmic translocation of Mig1, upon its phosphorylation by Snf1 in the nucleus, is the key regulatory step for releasing glucose repression. In this report we re-evaluate this model. We establish the coordinated repressive action of Mig1 and Cyc8-Tup1 on GAL1 transcription, but we find that Cyc8-Tup1 is not tethered by Mig1 to the promoter DNA. We demonstrate that both negative regulators occupy GAL1 continuously under either repression or activation conditions, although the majority of the Mig1 is redistributed to the cytoplasm upon activation. We show that Snf1-dependent phosphorylation of Mig1 abolishes interaction with Cyc8-Tup1, and we propose that regulation of this interaction, not the Mig1 cytoplasmic localization, is the molecular switch that controls transcriptional repression/de-repression.

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Year:  2004        PMID: 15031717      PMCID: PMC1299031          DOI: 10.1038/sj.embor.7400120

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  26 in total

Review 1.  In vivo cross-linking and immunoprecipitation for studying dynamic Protein:DNA associations in a chromatin environment.

Authors:  M H Kuo; C D Allis
Journal:  Methods       Date:  1999-11       Impact factor: 3.608

2.  Subcellular localization of the Snf1 kinase is regulated by specific beta subunits and a novel glucose signaling mechanism.

Authors:  O Vincent; R Townley; S Kuchin; M Carlson
Journal:  Genes Dev       Date:  2001-05-01       Impact factor: 11.361

3.  A new screen for protein interactions reveals that the Saccharomyces cerevisiae high mobility group proteins Nhp6A/B are involved in the regulation of the GAL1 promoter.

Authors:  H Laser; C Bongards; J Schüller; S Heck; N Johnsson; N Lehming
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

4.  Cti6, a PHD domain protein, bridges the Cyc8-Tup1 corepressor and the SAGA coactivator to overcome repression at GAL1.

Authors:  Manolis Papamichos-Chronakis; Theodoros Petrakis; Eleni Ktistaki; Irini Topalidou; Dimitris Tzamarias
Journal:  Mol Cell       Date:  2002-06       Impact factor: 17.970

Review 5.  Turning genes off by Ssn6-Tup1: a conserved system of transcriptional repression in eukaryotes.

Authors:  R L Smith; A D Johnson
Journal:  Trends Biochem Sci       Date:  2000-07       Impact factor: 13.807

Review 6.  Transcriptional control of the GAL/MEL regulon of yeast Saccharomyces cerevisiae: mechanism of galactose-mediated signal transduction.

Authors:  P J Bhat; T V Murthy
Journal:  Mol Microbiol       Date:  2001-06       Impact factor: 3.501

7.  Investigation of the impact of MIG1 and MIG2 on the physiology of Saccharomyces cerevisiae.

Authors:  C J Klein; J J Rasmussen; B Rønnow; L Olsson; J Nielsen
Journal:  J Biotechnol       Date:  1999-02-19       Impact factor: 3.307

8.  The nuclear exportin Msn5 is required for nuclear export of the Mig1 glucose repressor of Saccharomyces cerevisiae.

Authors:  M J DeVit; M Johnston
Journal:  Curr Biol       Date:  1999-11-04       Impact factor: 10.834

9.  The SNF1 kinase complex from Saccharomyces cerevisiae phosphorylates the transcriptional repressor protein Mig1p in vitro at four sites within or near regulatory domain 1.

Authors:  F C Smith; S P Davies; W A Wilson; D Carling; D G Hardie
Journal:  FEBS Lett       Date:  1999-06-18       Impact factor: 4.124

10.  Binding of the glucose-dependent Mig1p repressor to the GAL1 and GAL4 promoters in vivo: regulationby glucose and chromatin structure.

Authors:  E Frolova; M Johnston; J Majors
Journal:  Nucleic Acids Res       Date:  1999-03-01       Impact factor: 16.971

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  52 in total

1.  The Cyc8-Tup1 complex inhibits transcription primarily by masking the activation domain of the recruiting protein.

Authors:  Koon Ho Wong; Kevin Struhl
Journal:  Genes Dev       Date:  2011-12-01       Impact factor: 11.361

2.  Corepressor-directed preacetylation of histone H3 in promoter chromatin primes rapid transcriptional switching of cell-type-specific genes in yeast.

Authors:  Alec M Desimone; Jeffrey D Laney
Journal:  Mol Cell Biol       Date:  2010-05-03       Impact factor: 4.272

3.  Snf1/AMPK regulates Gcn5 occupancy, H3 acetylation and chromatin remodelling at S. cerevisiae ADY2 promoter.

Authors:  Georgia Abate; Emanuela Bastonini; Katherine A Braun; Loredana Verdone; Elton T Young; Micaela Caserta
Journal:  Biochim Biophys Acta       Date:  2012-01-28

4.  The Tup1 corepressor directs Htz1 deposition at a specific promoter nucleosome marking the GAL1 gene for rapid activation.

Authors:  Thomas Gligoris; George Thireos; Dimitris Tzamarias
Journal:  Mol Cell Biol       Date:  2007-03-26       Impact factor: 4.272

5.  A quantitative literature-curated gold standard for kinase-substrate pairs.

Authors:  Sara Sharifpoor; Alex N Nguyen Ba; Ji-Young Youn; Ji-Young Young; Dewald van Dyk; Helena Friesen; Alison C Douglas; Christoph F Kurat; Yolanda T Chong; Karen Founk; Alan M Moses; Brenda J Andrews
Journal:  Genome Biol       Date:  2011-04-14       Impact factor: 13.583

6.  The Snf1 protein kinase and Sit4 protein phosphatase have opposing functions in regulating TATA-binding protein association with the Saccharomyces cerevisiae INO1 promoter.

Authors:  Margaret K Shirra; Sarah E Rogers; Diane E Alexander; Karen M Arndt
Journal:  Genetics       Date:  2005-02-16       Impact factor: 4.562

7.  Global roles of Ssn6 in Tup1- and Nrg1-dependent gene regulation in the fungal pathogen, Candida albicans.

Authors:  Susana García-Sánchez; Abigail L Mavor; Claire L Russell; Silvia Argimon; Paul Dennison; Brice Enjalbert; Alistair J P Brown
Journal:  Mol Biol Cell       Date:  2005-04-06       Impact factor: 4.138

8.  The Snf1 kinase and proteasome-associated Rad23 regulate UV-responsive gene expression.

Authors:  Staton L Wade; Kunal Poorey; Stefan Bekiranov; David T Auble
Journal:  EMBO J       Date:  2009-08-13       Impact factor: 11.598

Review 9.  Regulations of sugar transporters: insights from yeast.

Authors:  J Horák
Journal:  Curr Genet       Date:  2013-03-01       Impact factor: 3.886

Review 10.  Life in the midst of scarcity: adaptations to nutrient availability in Saccharomyces cerevisiae.

Authors:  Bart Smets; Ruben Ghillebert; Pepijn De Snijder; Matteo Binda; Erwin Swinnen; Claudio De Virgilio; Joris Winderickx
Journal:  Curr Genet       Date:  2010-02       Impact factor: 3.886

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