Literature DB >> 15014907

Helical kink and channel behaviour: a comparative study with the peptaibols alamethicin, trichotoxin and antiamoebin.

H Duclohier1.   

Abstract

Kinks or bends introduced in peptides and proteins by "helical distorter" residues such as proline, other imino acids and glycine, especially when these are in close proximity in the sequence, are increasingly recognized as playing an essential role in the gating of channel-forming peptides as well as of physiological ion channels. Peptaibols are useful simple models for the much more complex biological ion channels, especially voltage-gated ones. In this short review, we compare the monomeric structures of three selected peptaibols (alamethicin, trichotoxin and antiamoebin) that widely differ with regards their near-central kink angles and dipolar moment orientations. These structural features are then shown to be correlated to the different patterns of channel activity, both at the macroscopic and single-channel levels of investigation.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15014907     DOI: 10.1007/s00249-003-0383-y

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  38 in total

1.  Model for a helical bundle channel based on the high-resolution crystal structure of trichotoxin_A50E.

Authors:  J K Chugh; H Brückner; B A Wallace
Journal:  Biochemistry       Date:  2002-10-29       Impact factor: 3.162

2.  Analysis of peptaibol sequence composition: implications for in vivo synthesis and channel formation.

Authors:  L Whitmore; B A Wallace
Journal:  Eur Biophys J       Date:  2003-10-08       Impact factor: 1.733

3.  Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

Authors:  A Nicholls; K A Sharp; B Honig
Journal:  Proteins       Date:  1991

4.  The structure and function of antiamoebin I, a proline-rich membrane-active polypeptide.

Authors:  C F Snook; G A Woolley; G Oliva; V Pattabhi; S F Wood; T L Blundell; B A Wallace
Journal:  Structure       Date:  1998-06-15       Impact factor: 5.006

5.  Action potentials induced in biomolecular lipid membranes.

Authors:  P Mueller; D O Rudin
Journal:  Nature       Date:  1968-02-24       Impact factor: 49.962

6.  The lowest conductance state of the alamethicin pore.

Authors:  W Hanke; G Boheim
Journal:  Biochim Biophys Acta       Date:  1980-03-13

7.  Alamethicin-like behaviour of new 18-residue peptaibols, trichorzins PA. Role of the C-terminal amino-alcohol in the ion channel forming activity.

Authors:  D Duval; P Cosette; S Rebuffat; H Duclohier; B Bodo; G Molle
Journal:  Biochim Biophys Acta       Date:  1998-03-02

Review 8.  Hinges, swivels and switches: the role of prolines in signalling via transmembrane alpha-helices.

Authors:  M S Sansom; H Weinstein
Journal:  Trends Pharmacol Sci       Date:  2000-11       Impact factor: 14.819

9.  Influence of proline position upon the ion channel activity of alamethicin.

Authors:  C Kaduk; H Duclohier; M Dathe; H Wenschuh; M Beyermann; G Molle; M Bienert
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

10.  Pores formed by the nicotinic receptor m2delta Peptide: a molecular dynamics simulation study.

Authors:  R J Law; D P Tieleman; M S P Sansom
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

View more
  12 in total

1.  Peptide aggregation and pore formation in a lipid bilayer: a combined coarse-grained and all atom molecular dynamics study.

Authors:  Lea Thøgersen; Birgit Schiøtt; Thomas Vosegaard; Niels Chr Nielsen; Emad Tajkhorshid
Journal:  Biophys J       Date:  2008-08-01       Impact factor: 4.033

2.  Molecular dynamics simulation of the antiamoebin ion channel: linking structure and conductance.

Authors:  Michael A Wilson; Chenyu Wei; Pär Bjelkmar; B A Wallace; Andrew Pohorille
Journal:  Biophys J       Date:  2011-05-18       Impact factor: 4.033

3.  Observing a model ion channel gating action in model cell membranes in real time in situ: membrane potential change induced alamethicin orientation change.

Authors:  Shuji Ye; Hongchun Li; Feng Wei; Joshua Jasensky; Andrew P Boughton; Pei Yang; Zhan Chen
Journal:  J Am Chem Soc       Date:  2012-04-03       Impact factor: 15.419

4.  Validity of the Electrodiffusion Model for Calculating Conductance of Simple Ion Channels.

Authors:  Andrew Pohorille; Michael A Wilson; Chenyu Wei
Journal:  J Phys Chem B       Date:  2016-12-12       Impact factor: 2.991

5.  A thermodynamic approach to alamethicin pore formation.

Authors:  Asif Rahaman; Themis Lazaridis
Journal:  Biochim Biophys Acta       Date:  2013-09-23

6.  Interactions of alamethicin with model cell membranes investigated using sum frequency generation vibrational spectroscopy in real time in situ.

Authors:  Shuji Ye; Khoi Tan Nguyen; Zhan Chen
Journal:  J Phys Chem B       Date:  2010-03-11       Impact factor: 2.991

7.  Functional characterization of pathogenic human MSH2 missense mutations in Saccharomyces cerevisiae.

Authors:  Alison E Gammie; Naz Erdeniz; Julia Beaver; Barbara Devlin; Afshan Nanji; Mark D Rose
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

Review 8.  In situ molecular level studies on membrane related peptides and proteins in real time using sum frequency generation vibrational spectroscopy.

Authors:  Shuji Ye; Khoi Tan Nguyen; Stéphanie V Le Clair; Zhan Chen
Journal:  J Struct Biol       Date:  2009-03-21       Impact factor: 2.867

9.  Hypopulvins, novel peptaibiotics from the polyporicolous fungus Hypocrea pulvinata, are produced during infection of its natural hosts.

Authors:  Christian René Röhrich; Anita Iversen; Walter Michael Jaklitsch; Hermann Voglmayr; Albrecht Berg; Heinrich Dörfelt; Ulf Thrane; Andreas Vilcinskas; Kristian Fog Nielsen; Hans Von Döhren; Hans Brückner; Thomas Degenkolb
Journal:  Fungal Biol       Date:  2012-10-26

10.  Antimicrobial peptide trichokonin VI-induced alterations in the morphological and nanomechanical properties of Bacillus subtilis.

Authors:  Hai-Nan Su; Zhi-Hua Chen; Xiao-Yan Song; Xiu-Lan Chen; Mei Shi; Bai-Cheng Zhou; Xian Zhao; Yu-Zhong Zhang
Journal:  PLoS One       Date:  2012-09-25       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.