Literature DB >> 9655831

The structure and function of antiamoebin I, a proline-rich membrane-active polypeptide.

C F Snook1, G A Woolley, G Oliva, V Pattabhi, S F Wood, T L Blundell, B A Wallace.   

Abstract

BACKGROUND: Antiamoebin is a member of the peptaibol family of polypeptides and has a unique antibiotic activity: it acts as an antiamoebic agent, but does not effectively haemolyze erythrocytes even though it does exhibit membrane-modifying activity.
RESULTS: The structure of antiamoebin I has been determined by X-ray crystallography at 1.4 A resolution. The molecule forms a helical structure, which, as a result of the presence of a number of proline and hydroxyproline residues, has a deep bend in the middle. Circular dichroism spectroscopy, single-channel conductance studies and fluorescence diffusion studies suggest a mode of ion transport that is entirely different from that of the other two members of the peptaibol family (alamethicin and zervamicin) whose structures and functions have been examined in detail.
CONCLUSIONS: The structure of the polypeptide has been determined and a functional model for its mode of action in membranes is presented. Although under some conditions antiamoebin may form ion channels, unlike the closely related alamethicin and zervamicin polypeptides, its major membrane-modifying activity appears to be as an ion carrier.

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Year:  1998        PMID: 9655831     DOI: 10.1016/s0969-2126(98)00079-3

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  12 in total

1.  Spatial structure of zervamicin IIB bound to DPC micelles: implications for voltage-gating.

Authors:  Z O Shenkarev; T A Balashova; R G Efremov; Z A Yakimenko; T V Ovchinnikova; J Raap; A S Arseniev
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

2.  Solution NMR studies of antiamoebin, a membrane channel-forming polypeptide.

Authors:  T P Galbraith; R Harris; P C Driscoll; B A Wallace
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

3.  Analysis of peptaibol sequence composition: implications for in vivo synthesis and channel formation.

Authors:  L Whitmore; B A Wallace
Journal:  Eur Biophys J       Date:  2003-10-08       Impact factor: 1.733

4.  Conductance studies on trichotoxin_A50E and implications for channel structure.

Authors:  H Duclohier; G M Alder; C L Bashford; H Brückner; J K Chugh; B A Wallace
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

Review 5.  Helical kink and channel behaviour: a comparative study with the peptaibols alamethicin, trichotoxin and antiamoebin.

Authors:  H Duclohier
Journal:  Eur Biophys J       Date:  2004-03-11       Impact factor: 1.733

6.  Molecular dynamics simulation of the antiamoebin ion channel: linking structure and conductance.

Authors:  Michael A Wilson; Chenyu Wei; Pär Bjelkmar; B A Wallace; Andrew Pohorille
Journal:  Biophys J       Date:  2011-05-18       Impact factor: 4.033

7.  Modeling the secondary structures of the peptaibols antiamoebin I and zervamicin II modified with D-amino acids and proline analogues.

Authors:  Tarsila G Castro; Nuno M Micaêlo; Manuel Melle-Franco
Journal:  J Mol Model       Date:  2017-10-16       Impact factor: 1.810

8.  Evidence for phenylalanine zipper-mediated dimerization in the X-ray crystal structure of a magainin 2 analogue.

Authors:  Zvi Hayouka; David E Mortenson; Dale F Kreitler; Bernard Weisblum; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2013-10-08       Impact factor: 15.419

9.  Peptaibol zervamicin IIb structure and dynamics refinement from transhydrogen bond J couplings.

Authors:  Z O Shenkarev; T A Balashova; Z A Yakimenko; T V Ovchinnikova; A S Arseniev
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

10.  Structure and alignment of the membrane-associated peptaibols ampullosporin A and alamethicin by oriented 15N and 31P solid-state NMR spectroscopy.

Authors:  Evgeniy S Salnikov; Herdis Friedrich; Xing Li; Philippe Bertani; Siegmund Reissmann; Christian Hertweck; Joe D J O'Neil; Jan Raap; Burkhard Bechinger
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

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