Literature DB >> 14993290

Redundancy of the two dicer genes in transgene-induced posttranscriptional gene silencing in Neurospora crassa.

Caterina Catalanotto1, Massimiliano Pallotta, Paul ReFalo, Matthew S Sachs, Laurence Vayssie, Giuseppe Macino, Carlo Cogoni.   

Abstract

RNA interference (RNAi) in animals, cosuppression in plants, and quelling in fungi are homology-dependent gene silencing mechanisms in which the introduction of either double-stranded RNA (dsRNA) or transgenes induces sequence-specific mRNA degradation. These phenomena share a common genetic and mechanistic basis. The accumulation of short interfering RNA (siRNA) molecules that guide sequence-specific mRNA degradation is a common feature in both silencing mechanisms, as is the component of the RNase complex involved in mRNA cleavage. During RNAi in animal cells, dsRNA is processed into siRNA by an RNase III enzyme called Dicer. Here we show that elimination of the activity of two Dicer-like genes by mutation in the fungus Neurospora crassa eliminates transgene-induced gene silencing (quelling) and the processing of dsRNA to an siRNA form. The two Dicer-like genes appear redundant because single mutants are quelling proficient. This first demonstration of the involvement of Dicer in gene silencing induced by transgenes supports a model by which a dsRNA produced by the activity of cellular RNA-dependent RNA polymerases on transgenic transcripts is an essential intermediate of silencing.

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Year:  2004        PMID: 14993290      PMCID: PMC355837          DOI: 10.1128/MCB.24.6.2536-2545.2004

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  36 in total

1.  The rde-1 gene, RNA interference, and transposon silencing in C. elegans.

Authors:  H Tabara; M Sarkissian; W G Kelly; J Fleenor; A Grishok; L Timmons; A Fire; C C Mello
Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

2.  Cellular RNA-dependent RNA polymerase involved in posttranscriptional gene silencing has two distinct activity modes.

Authors:  Eugene V Makeyev; Dennis H Bamford
Journal:  Mol Cell       Date:  2002-12       Impact factor: 17.970

3.  Flavonoid genes in petunia: addition of a limited number of gene copies may lead to a suppression of gene expression.

Authors:  A R van der Krol; L A Mur; M Beld; J N Mol; A R Stuitje
Journal:  Plant Cell       Date:  1990-04       Impact factor: 11.277

4.  Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance.

Authors:  P Mourrain; C Béclin; T Elmayan; F Feuerbach; C Godon; J B Morel; D Jouette; A M Lacombe; S Nikic; N Picault; K Rémoué; M Sanial; T A Vo; H Vaucheret
Journal:  Cell       Date:  2000-05-26       Impact factor: 41.582

5.  Isolation of quelling-defective (qde) mutants impaired in posttranscriptional transgene-induced gene silencing in Neurospora crassa.

Authors:  C Cogoni; G Macino
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

6.  Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase.

Authors:  C Cogoni; G Macino
Journal:  Nature       Date:  1999-05-13       Impact factor: 49.962

7.  A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans.

Authors:  S W Knight; B L Bass
Journal:  Science       Date:  2001-08-02       Impact factor: 47.728

8.  Evolutionarily conserved features of the arginine attenuator peptide provide the necessary requirements for its function in translational regulation.

Authors:  P Fang; Z Wang; M S Sachs
Journal:  J Biol Chem       Date:  2000-09-01       Impact factor: 5.157

9.  AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals.

Authors:  M Fagard; S Boutet; J B Morel; C Bellini; H Vaucheret
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

10.  Posttranscriptional gene silencing is not compromised in the Arabidopsis CARPEL FACTORY (DICER-LIKE1) mutant, a homolog of Dicer-1 from Drosophila.

Authors:  E Jean Finnegan; Rogerio Margis; Peter M Waterhouse
Journal:  Curr Biol       Date:  2003-02-04       Impact factor: 10.834

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  76 in total

Review 1.  RNA-based antiviral immunity.

Authors:  Shou-Wei Ding
Journal:  Nat Rev Immunol       Date:  2010-08-13       Impact factor: 53.106

2.  In vitro activities of the multifunctional RNA silencing polymerase QDE-1 of Neurospora crassa.

Authors:  Antti P Aalto; Minna M Poranen; Jonathan M Grimes; David I Stuart; Dennis H Bamford
Journal:  J Biol Chem       Date:  2010-07-20       Impact factor: 5.157

3.  QIP, a protein that converts duplex siRNA into single strands, is required for meiotic silencing by unpaired DNA.

Authors:  Hua Xiao; William G Alexander; Thomas M Hammond; Erin C Boone; Tony D Perdue; Patricia J Pukkila; Patrick K T Shiu
Journal:  Genetics       Date:  2010-06-15       Impact factor: 4.562

4.  Sex-induced silencing defends the genome of Cryptococcus neoformans via RNAi.

Authors:  Xuying Wang; Yen-Ping Hsueh; Wenjun Li; Anna Floyd; Rebecca Skalsky; Joseph Heitman
Journal:  Genes Dev       Date:  2010-11-15       Impact factor: 11.361

5.  Hypovirus papain-like protease p29 suppresses RNA silencing in the natural fungal host and in a heterologous plant system.

Authors:  Gerrit C Segers; Rene van Wezel; Xuemei Zhang; Yiguo Hong; Donald L Nuss
Journal:  Eukaryot Cell       Date:  2006-06

Review 6.  Exploring the functions of RNA interference pathway proteins: some functions are more RISCy than others?

Authors:  Katarzyna Jaronczyk; Jon B Carmichael; Tom C Hobman
Journal:  Biochem J       Date:  2005-05-01       Impact factor: 3.857

7.  Evolution and diversification of RNA silencing proteins in fungi.

Authors:  Hitoshi Nakayashiki; Naoki Kadotani; Shigeyuki Mayama
Journal:  J Mol Evol       Date:  2006-06-16       Impact factor: 2.395

8.  QIP, a putative exonuclease, interacts with the Neurospora Argonaute protein and facilitates conversion of duplex siRNA into single strands.

Authors:  Mekhala Maiti; Heng-Chi Lee; Yi Liu
Journal:  Genes Dev       Date:  2007-02-20       Impact factor: 11.361

Review 9.  Meiotic silencing and the epigenetics of sex.

Authors:  William G Kelly; Rodolfo Aramayo
Journal:  Chromosome Res       Date:  2007       Impact factor: 5.239

Review 10.  The role of MicroRNA molecules and MicroRNA-regulating machinery in the pathogenesis and progression of epithelial ovarian cancer.

Authors:  Xiyin Wang; Mircea Ivan; Shannon M Hawkins
Journal:  Gynecol Oncol       Date:  2017-08-31       Impact factor: 5.482

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