Literature DB >> 20706278

RNA-based antiviral immunity.

Shou-Wei Ding1.   

Abstract

In eukaryotic RNA-based antiviral immunity, viral double-stranded RNA is recognized as a pathogen-associated molecular pattern and processed into small interfering RNAs (siRNAs) by the host ribonuclease Dicer. After amplification by host RNA-dependent RNA polymerases in some cases, these virus-derived siRNAs guide specific antiviral immunity through RNA interference and related RNA silencing effector mechanisms. Here, I review recent studies on the features of viral siRNAs and other virus-derived small RNAs from virus-infected fungi, plants, insects, nematodes and vertebrates and discuss the innate and adaptive properties of RNA-based antiviral immunity.

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Year:  2010        PMID: 20706278     DOI: 10.1038/nri2824

Source DB:  PubMed          Journal:  Nat Rev Immunol        ISSN: 1474-1733            Impact factor:   53.106


  116 in total

1.  An important role of an inducible RNA-dependent RNA polymerase in plant antiviral defense.

Authors:  Z Xie; B Fan; C Chen; Z Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-15       Impact factor: 11.205

2.  An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal.

Authors:  Frank Schwach; Fabian E Vaistij; Louise Jones; David C Baulcombe
Journal:  Plant Physiol       Date:  2005-07-22       Impact factor: 8.340

3.  Essential function in vivo for Dicer-2 in host defense against RNA viruses in drosophila.

Authors:  Delphine Galiana-Arnoux; Catherine Dostert; Anette Schneemann; Jules A Hoffmann; Jean-Luc Imler
Journal:  Nat Immunol       Date:  2006-03-23       Impact factor: 25.606

4.  RNA silencing of host transcripts by cauliflower mosaic virus requires coordinated action of the four Arabidopsis Dicer-like proteins.

Authors:  Guillaume Moissiard; Olivier Voinnet
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-12       Impact factor: 11.205

5.  The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins.

Authors:  Atsushi Takeda; Shintaro Iwasaki; Toshiaki Watanabe; Maki Utsumi; Yuichiro Watanabe
Journal:  Plant Cell Physiol       Date:  2008-03-14       Impact factor: 4.927

6.  An endogenous small interfering RNA pathway in Drosophila.

Authors:  Benjamin Czech; Colin D Malone; Rui Zhou; Alexander Stark; Catherine Schlingeheyde; Monica Dus; Norbert Perrimon; Manolis Kellis; James A Wohlschlegel; Ravi Sachidanandam; Gregory J Hannon; Julius Brennecke
Journal:  Nature       Date:  2008-05-07       Impact factor: 49.962

7.  The Polerovirus F box protein P0 targets ARGONAUTE1 to suppress RNA silencing.

Authors:  Diane Bortolamiol; Maghsoud Pazhouhandeh; Katia Marrocco; Pascal Genschik; Véronique Ziegler-Graff
Journal:  Curr Biol       Date:  2007-09-18       Impact factor: 10.834

8.  Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing.

Authors:  Todd Blevins; Rajendran Rajeswaran; Padubidri V Shivaprasad; Daria Beknazariants; Azeddine Si-Ammour; Hyun-Sook Park; Franck Vazquez; Dominique Robertson; Frederick Meins; Thomas Hohn; Mikhail M Pooggin
Journal:  Nucleic Acids Res       Date:  2006-11-07       Impact factor: 16.971

9.  Small RNA deep sequencing reveals role for Arabidopsis thaliana RNA-dependent RNA polymerases in viral siRNA biogenesis.

Authors:  Xiaopeng Qi; Forrest Sheng Bao; Zhixin Xie
Journal:  PLoS One       Date:  2009-03-24       Impact factor: 3.240

10.  Six RNA viruses and forty-one hosts: viral small RNAs and modulation of small RNA repertoires in vertebrate and invertebrate systems.

Authors:  Poornima Parameswaran; Ella Sklan; Courtney Wilkins; Trever Burgon; Melanie A Samuel; Rui Lu; K Mark Ansel; Vigo Heissmeyer; Shirit Einav; William Jackson; Tammy Doukas; Suman Paranjape; Charlotta Polacek; Flavia Barreto dos Santos; Roxana Jalili; Farbod Babrzadeh; Baback Gharizadeh; Dirk Grimm; Mark Kay; Satoshi Koike; Peter Sarnow; Mostafa Ronaghi; Shou-Wei Ding; Eva Harris; Marie Chow; Michael S Diamond; Karla Kirkegaard; Jeffrey S Glenn; Andrew Z Fire
Journal:  PLoS Pathog       Date:  2010-02-12       Impact factor: 6.823

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  354 in total

1.  On the nature of in vivo requirements for rde-4 in RNAi and developmental pathways in C. elegans.

Authors:  Daniel Blanchard; Poornima Parameswaran; Javier Lopez-Molina; Jonathan Gent; Jamie Fleenor Saynuk; Andrew Fire
Journal:  RNA Biol       Date:  2011-05-01       Impact factor: 4.652

2.  Homology-independent discovery of replicating pathogenic circular RNAs by deep sequencing and a new computational algorithm.

Authors:  Qingfa Wu; Ying Wang; Mengji Cao; Vitantonio Pantaleo; Joszef Burgyan; Wan-Xiang Li; Shou-Wei Ding
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-15       Impact factor: 11.205

Review 3.  Tick cell lines for study of Crimean-Congo hemorrhagic fever virus and other arboviruses.

Authors:  Lesley Bell-Sakyi; Alain Kohl; Dennis A Bente; John K Fazakerley
Journal:  Vector Borne Zoonotic Dis       Date:  2011-09-28       Impact factor: 2.133

4.  RNA-based immunity terminates viral infection in adult Drosophila in the absence of viral suppression of RNA interference: characterization of viral small interfering RNA populations in wild-type and mutant flies.

Authors:  Yan-Hong Han; Ying-Jun Luo; Qingfa Wu; Juan Jovel; Xiao-Hong Wang; Roghiyh Aliyari; Chenggui Han; Wan-Xiang Li; Shou-Wei Ding
Journal:  J Virol       Date:  2011-09-28       Impact factor: 5.103

5.  Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells.

Authors:  Esther Schnettler; Mark G Sterken; Jason Y Leung; Stefan W Metz; Corinne Geertsema; Rob W Goldbach; Just M Vlak; Alain Kohl; Alexander A Khromykh; Gorben P Pijlman
Journal:  J Virol       Date:  2012-10-03       Impact factor: 5.103

6.  Drosha as an interferon-independent antiviral factor.

Authors:  Jillian S Shapiro; Sonja Schmid; Lauren C Aguado; Leah R Sabin; Ari Yasunaga; Jaehee V Shim; David Sachs; Sara Cherry; Benjamin R tenOever
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-28       Impact factor: 11.205

7.  Activation of Tomato Bushy Stunt Virus RNA-Dependent RNA Polymerase by Cellular Heat Shock Protein 70 Is Enhanced by Phospholipids In Vitro.

Authors:  Judit Pogany; Peter D Nagy
Journal:  J Virol       Date:  2015-03-11       Impact factor: 5.103

8.  Homologous RIG-I-like helicase proteins direct RNAi-mediated antiviral immunity in C. elegans by distinct mechanisms.

Authors:  Xunyang Guo; Rui Zhang; Jeffrey Wang; Shou-Wei Ding; Rui Lu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

9.  Magnaporthe oryzae Induces the Expression of a MicroRNA to Suppress the Immune Response in Rice.

Authors:  Xin Zhang; Yalin Bao; Deqi Shan; Zhihui Wang; Xiaoning Song; Zhaoyun Wang; Jiansheng Wang; Liqiang He; Liang Wu; Zhengguang Zhang; Dongdong Niu; Hailing Jin; Hongwei Zhao
Journal:  Plant Physiol       Date:  2018-03-16       Impact factor: 8.340

Review 10.  Dicer's role as an antiviral: still an enigma.

Authors:  Christopher R MacKay; Jennifer P Wang; Evelyn A Kurt-Jones
Journal:  Curr Opin Immunol       Date:  2013-11-22       Impact factor: 7.486

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