Literature DB >> 14986177

Alkalimonas amylolytica gen. nov., sp. nov., and Alkalimonas delamerensis gen. nov., sp. nov., novel alkaliphilic bacteria from soda lakes in China and East Africa.

Yanhe Ma1, Yanfen Xue, William D Grant, Nadine C Collins, Andrew W Duckworth, Robert P Van Steenbergen, Brian E Jones.   

Abstract

Two related novel alkaliphilic and slightly halophilic bacteria are described. They are strain N10 from Lake Chahannor in China and strain 1E1 from Lake Elmenteita in East Africa. Both strains are strictly aerobic, heterotrophic, alkaliphilic, mesophilic, and require NaCl for growth. The optimal conditions for growth were at pH 10-10.5 and 2-3% (w/v) NaCl. Cells of both strains were Gram-negative, rod-shaped, non-spore-forming, and motile with a single polar flagellum. Cellular fatty acids in both strains were predominantly saturated and mono-unsaturated straight-chain fatty acids (16:0, 16:1omega7c and 18:1omega7c). The major isoprenoid quinone of both strains was Q8. The major polar lipids are phosphatidylglycerol, diphosphatidylglycerol, phosphatidylglycerol phosphate and phosphatidylethanolamine. The guanine plus cytosine (G + C) content of the DNA was 52.5 mol% and 55.4 mol%, respectively. Phylogenetic analysis revealed that the two strains formed a distinct lineage within the gamma-3 subclass of the Proteobacteria. The strains shared a 16S rDNA sequence similarity of 96.1% and showed less than 93.7% of sequence similarity to any other known species. Based on polyphasic data, the two strains were differentiated from currently recognized genera and represent a new genus, Alkalimonas gen. nov., with two species, Alkalimonas amylolytica sp. nov. (type strain is N10T = AS 1.3430) and Alkalimonas delamerensis sp. nov. ( type strain is 1E1(P, T) = CBS 391.94). The GenBank accession numbers for the 16S rRNA gene sequence of strains N10 and 1E1 are AF250323 and X92130, respectively. Copyright 2004 Springer-Verlag

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Year:  2004        PMID: 14986177     DOI: 10.1007/s00792-004-0377-4

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  18 in total

Review 1.  Alkaliphiles: some applications of their products for biotechnology.

Authors:  K Horikoshi
Journal:  Microbiol Mol Biol Rev       Date:  1999-12       Impact factor: 11.056

2.  An improved technique for staining red halophilic bacteria.

Authors:  H P DUSSAULT
Journal:  J Bacteriol       Date:  1955-10       Impact factor: 3.490

3.  Diversity of Kenyan soda lake alkaliphiles assessed by molecular methods.

Authors:  Helen C Rees; William D Grant; Brian E Jones; Shaun Heaphy
Journal:  Extremophiles       Date:  2003-10-29       Impact factor: 2.395

4.  Studies on the spectrophotometric determination of DNA hybridization from renaturation rates.

Authors:  V A Huss; H Festl; K H Schleifer
Journal:  Syst Appl Microbiol       Date:  1983       Impact factor: 4.022

5.  TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment.

Authors:  Y Van de Peer; R De Wachter
Journal:  Comput Appl Biosci       Date:  1994-09

6.  Polyphasic taxonomic approach in the description of Alishewanella fetalis gen. nov., sp. nov., isolated from a human foetus.

Authors:  B F Vogel; K Venkateswaran; H Christensen; E Falsen; G Christiansen; L Gram
Journal:  Int J Syst Evol Microbiol       Date:  2000-05       Impact factor: 2.747

7.  Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations.

Authors:  G Gauthier; M Gauthier; R Christen
Journal:  Int J Syst Bacteriol       Date:  1995-10

8.  Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium.

Authors:  M J Gauthier; B Lafay; R Christen; L Fernandez; M Acquaviva; P Bonin; J C Bertrand
Journal:  Int J Syst Bacteriol       Date:  1992-10

9.  Dietzia natronolimnaios sp. nov., a new member of the genus Dietzia isolated from an east African soda lake.

Authors:  A W Duckworth; S Grant; W D Grant; B E Jones; D Meijer
Journal:  Extremophiles       Date:  1998-08       Impact factor: 2.395

Review 10.  Microbial diversity of soda lakes.

Authors:  B E Jones; W D Grant; A W Duckworth; G G Owenson
Journal:  Extremophiles       Date:  1998-08       Impact factor: 2.395

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  13 in total

1.  Isolation and characterisation of bacteria from the haloalkaline Lake Elmenteita, Kenya.

Authors:  Romano Mwirichia; A W Muigai; B Tindall; H I Boga; E Stackebrandt
Journal:  Extremophiles       Date:  2010-04-17       Impact factor: 2.395

2.  Bacterial diversity in permanently cold and alkaline ikaite columns from Greenland.

Authors:  Mariane Schmidt; Anders Priemé; Peter Stougaard
Journal:  Extremophiles       Date:  2006-06-13       Impact factor: 2.395

3.  Changes in the bacterial populations of the highly alkaline saline soil of the former lake Texcoco (Mexico) following flooding.

Authors:  César Valenzuela-Encinas; Isabel Neria-González; Rocio J Alcántara-Hernández; Isabel Estrada-Alvarado; Francisco Javier Zavala-Díaz de la Serna; Luc Dendooven; Rodolfo Marsch
Journal:  Extremophiles       Date:  2009-04-23       Impact factor: 2.395

4.  Bacterial diversity and composition of an alkaline uranium mine tailings-water interface.

Authors:  Nurul H Khan; Viorica F Bondici; Prabhakara G Medihala; John R Lawrence; Gideon M Wolfaardt; Jeff Warner; Darren R Korber
Journal:  J Microbiol       Date:  2013-09-14       Impact factor: 3.422

5.  Effects of salts on activity of halophilic cellulase with glucomannanase activity isolated from alkaliphilic and halophilic Bacillus sp. BG-CS10.

Authors:  Guimin Zhang; Shunyi Li; Yanfen Xue; Liangwei Mao; Yanhe Ma
Journal:  Extremophiles       Date:  2011-10-20       Impact factor: 2.395

6.  Planktonic bacterial community composition of an extremely shallow soda pond during a phytoplankton bloom revealed by cultivation and molecular cloning.

Authors:  Andrea K Borsodi; Mónika Knáb; Katalin Czeibert; Károly Márialigeti; Lajos Vörös; Boglárka Somogyi
Journal:  Extremophiles       Date:  2013-04-23       Impact factor: 2.395

7.  Isolation and characterization of novel bacterial taxa from extreme alkali-saline soil.

Authors:  Wei Shi; Tetsuo Takano; Shenkui Liu
Journal:  World J Microbiol Biotechnol       Date:  2012-02-14       Impact factor: 3.312

8.  The activity profile of the NhaD-type Na+(Li+)/H+ antiporter from the soda Lake Haloalkaliphile Alkalimonas amylolytica is adaptive for the extreme environment.

Authors:  Jun Liu; Yanfen Xue; Quanhui Wang; Yi Wei; Talia H Swartz; David B Hicks; Masahiro Ito; Yanhe Ma; Terry A Krulwich
Journal:  J Bacteriol       Date:  2005-11       Impact factor: 3.490

9.  Three putative cation/proton antiporters from the soda lake alkaliphile Alkalimonas amylolytica N10 complement an alkali-sensitive Escherichia coli mutant.

Authors:  Yi Wei; Jun Liu; Yanhe Ma; Terry A Krulwich
Journal:  Microbiology       Date:  2007-07       Impact factor: 2.777

Review 10.  Alkaliphilic Bacteria with Impact on Industrial Applications, Concepts of Early Life Forms, and Bioenergetics of ATP Synthesis.

Authors:  Laura Preiss; David B Hicks; Shino Suzuki; Thomas Meier; Terry Ann Krulwich
Journal:  Front Bioeng Biotechnol       Date:  2015-06-03
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