Literature DB >> 14984097

High-speed chromosome sorting.

Sherrif F Ibrahim1, Ger van den Engh.   

Abstract

Structural and genetic characterization of chromosomes is necessary to understand both normal and pathologic physiology in any species. Flow cytometry and cell sorting technologies provide a means for precise measurement of chromosomal makeup as well as for the isolation of specific chromosomes for further study. Advancements in molecular biology protocols and pressures from large-scale sequencing endeavors placed increased demand on the developers of these instruments for enhanced throughput and quality of results. The ensuing improvements in sorting performance led to the development of a new generation of cytometers known as high-speed cell sorters. These machines provide superior results in less time and are cheaper and simpler to operate than their predecessors. Robust chromosome sorting can now be performed in the laboratories of individual investigators for a variety of gene- and sequence-specific studies. Resolution of the flow karyotype with increased refinement, and the development of new applications for this technology will assure that cell sorting continues to play an important role in cytogenetics, our understanding of molecular processes such as evolution and disease etiology, and ultimately serve as a launching point for predictive medicine.

Mesh:

Year:  2004        PMID: 14984097     DOI: 10.1023/b:chro.0000009328.96958.a6

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  52 in total

1.  Micro- and macrochromosome paints generated by flow cytometry and microdissection: tools for mapping the chicken genome.

Authors:  D K Griffin; F Haberman; J Masabanda; P O'Brien; M Bagga; A Sazanov; J Smith; D W Burt; M Ferguson-Smith; J Wienberg
Journal:  Cytogenet Cell Genet       Date:  1999

Review 2.  Commercial high speed machines open new opportunities in high throughput flow cytometry (HTFC).

Authors:  R G Ashcroft; P A Lopez
Journal:  J Immunol Methods       Date:  2000-09-21       Impact factor: 2.303

3.  Purification of the chromosomes of the Indian muntjac by flow sorting.

Authors:  A V Carrano; J W Gray; D H Moore; J L Minkler; B H Mayall; M A van Dilla; M L Mendelsohn
Journal:  J Histochem Cytochem       Date:  1976-01       Impact factor: 2.479

4.  Flow microfluorometric analysis of isolated Chinese hamster chromosomes.

Authors:  E Stubblefield; S Cram; L Deaven
Journal:  Exp Cell Res       Date:  1975-09       Impact factor: 3.905

5.  Reciprocal chromosome painting between human and prosimians (Eulemur macaco macaco and E. fulvus mayottensis).

Authors:  S Müller; P C O'Brien; M A Ferguson-Smith; J Wienberg
Journal:  Cytogenet Cell Genet       Date:  1997

6.  X chromosome deletions detectable by flow cytometry in some patients with steroid sulphatase deficiency (X-linked ichthyosis).

Authors:  A Cooke; E F Gillard; J R Yates; M J Mitchell; D A Aitken; D M Weir; N A Affara; M A Ferguson-Smith
Journal:  Hum Genet       Date:  1988-05       Impact factor: 4.132

7.  Chromosome 2-specific DNA clones from flow-sorted chromosomes of tomato.

Authors:  K Arumuganathan; G B Martin; H Telenius; S D Tanksley; E D Earle
Journal:  Mol Gen Genet       Date:  1994-03

8.  The LLNL high-speed sorter: design features, operational characteristics, and biological utility.

Authors:  D Peters; E Branscomb; P Dean; T Merrill; D Pinkel; M Van Dilla; J W Gray
Journal:  Cytometry       Date:  1985-07

9.  Lack of correlation between AT frequency and genome size in higher plants and the effect of nonrandomness of base sequences on dye binding.

Authors:  Martin Barow; Armin Meister
Journal:  Cytometry       Date:  2002-01-01

10.  Integration of cytogenetic landmarks into the draft sequence of the human genome.

Authors:  V G Cheung; N Nowak; W Jang; I R Kirsch; S Zhao; X N Chen; T S Furey; U J Kim; W L Kuo; M Olivier; J Conroy; A Kasprzyk; H Massa; R Yonescu; S Sait; C Thoreen; A Snijders; E Lemyre; J A Bailey; A Bruzel; W D Burrill; S M Clegg; S Collins; P Dhami; C Friedman; C S Han; S Herrick; J Lee; A H Ligon; S Lowry; M Morley; S Narasimhan; K Osoegawa; Z Peng; I Plajzer-Frick; B J Quade; D Scott; K Sirotkin; A A Thorpe; J W Gray; J Hudson; D Pinkel; T Ried; L Rowen; G L Shen-Ong; R L Strausberg; E Birney; D F Callen; J F Cheng; D R Cox; N A Doggett; N P Carter; E E Eichler; D Haussler; J R Korenberg; C C Morton; D Albertson; G Schuler; P J de Jong; B J Trask
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

View more
  9 in total

Review 1.  Applications of targeted gene capture and next-generation sequencing technologies in studies of human deafness and other genetic disabilities.

Authors:  Xi Lin; Wenxue Tang; Shoeb Ahmad; Jingqiao Lu; Candice C Colby; Jason Zhu; Qing Yu
Journal:  Hear Res       Date:  2012-01-14       Impact factor: 3.208

2.  Prenatal detection of unbalanced chromosomal rearrangements by array CGH.

Authors:  L Rickman; H Fiegler; C Shaw-Smith; R Nash; V Cirigliano; G Voglino; B L Ng; C Scott; J Whittaker; M Adinolfi; N P Carter; M Bobrow
Journal:  J Med Genet       Date:  2005-09-30       Impact factor: 6.318

3.  Chromosome localization of microsatellite markers in the shrews of the Sorex araneus group.

Authors:  Patrick Basset; Glenn Yannic; Fengtang Yang; Patricia C M O'Brien; Alexander S Graphodatsky; Malcolm A Ferguson-Smith; Gabriel Balmus; Vitaly T Volobouev; Jacques Hausser
Journal:  Chromosome Res       Date:  2006-04-20       Impact factor: 5.239

4.  Flow cytometry sorting protocol of Bacillus spore using ultraviolet laser and autofluorescence as main sorting criterion.

Authors:  Christian Laflamme; Daniel Verreault; Jim Ho; Caroline Duchaine
Journal:  J Fluoresc       Date:  2006-09-22       Impact factor: 2.217

Review 5.  Exome sequencing: the sweet spot before whole genomes.

Authors:  Jamie K Teer; James C Mullikin
Journal:  Hum Mol Genet       Date:  2010-08-12       Impact factor: 6.150

6.  A computer simulator for assessing different challenges and strategies of de novo sequence assembly.

Authors:  Bjarne Knudsen; Roald Forsberg; Michael M Miyamoto
Journal:  Genes (Basel)       Date:  2010-09-13       Impact factor: 4.096

Review 7.  Bridging the Gap between Vertebrate Cytogenetics and Genomics with Single-Chromosome Sequencing (ChromSeq).

Authors:  Alessio Iannucci; Alexey I Makunin; Artem P Lisachov; Claudio Ciofi; Roscoe Stanyon; Marta Svartman; Vladimir A Trifonov
Journal:  Genes (Basel)       Date:  2021-01-19       Impact factor: 4.096

Review 8.  Mysteries and unsolved problems of mammalian fertilization and related topics.

Authors:  Ryuzo Yanagimachi
Journal:  Biol Reprod       Date:  2022-04-26       Impact factor: 4.161

9.  Massively-parallel sequencing of genes on a single chromosome: a comparison of solution hybrid selection and flow sorting.

Authors:  Jamie K Teer; Jennifer J Johnston; Sarah L Anzick; Marbin Pineda; Gary Stone; Paul S Meltzer; James C Mullikin; Leslie G Biesecker
Journal:  BMC Genomics       Date:  2013-04-15       Impact factor: 3.969

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.