Literature DB >> 14976253

Blue light-induced transcription of plastid-encoded psbD gene is mediated by a nuclear-encoded transcription initiation factor, AtSig5.

Yuichi Tsunoyama1, Yoko Ishizaki, Kazuya Morikawa, Maki Kobori, Yoichi Nakahira, Go Takeba, Yoshinori Toyoshima, Takashi Shiina.   

Abstract

Light is one of the most important environmental factors regulating expression of photosynthesis genes. The plastid psbD gene encoding the photosystem II reaction center protein D2 is under the control of a unique blue light responsive promoter (BLRP) that is transcribed by a bacterial-type plastid RNA polymerase (PEP). Promoter recognition of PEP is mediated by one of the six nuclear-encoded sigma factors in Arabidopsis. The replacement of the plastid sigma factor associated with PEP may be the major mechanism for switching of plastid transcription pattern in response to environmental and developmental signals. This study demonstrates that AtSig5 is a unique sigma factor that is essential for psbD BLRP activity. A T-DNA insertional mutant with reduced AtSIG5 expression resulted in loss of primary transcripts from the psbD BLRP. Furthermore, transient overexpression of AtSig5 in dark-adapted protoplasts specifically elevated psbD and psbA transcription activities. On the other hand, overproduction of AtSig2 enhanced the transcription of psbA gene and trnE operon, but not psbD transcription. The AtSIG5 gene is phylogenetically distinct from other plastid sigma factors, and its expression is induced exclusively by blue light. We propose that AtSig5 acts as a mediator of blue light signaling that specifically activates the psbD BLRP in response to blue light in Arabidopsis.

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Year:  2004        PMID: 14976253      PMCID: PMC365785          DOI: 10.1073/pnas.0308362101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Developmental stage-specific multi-subunit plastid RNA polymerases (PEP) in wheat.

Authors:  J Satoh; K Baba; Y Nakahira; Y Tsunoyama; T Shiina; Y Toyoshima
Journal:  Plant J       Date:  1999-05       Impact factor: 6.417

2.  Cryptochrome 1, cryptochrome 2, and phytochrome a co-activate the chloroplast psbD blue light-responsive promoter.

Authors:  K E Thum; M Kim; D A Christopher; J E Mullet
Journal:  Plant Cell       Date:  2001-12       Impact factor: 11.277

3.  Blue light specific and differential expression of a plastid sigma factor, Sig5 in Arabidopsis thaliana.

Authors:  Yuichi Tsunoyama; Kazuya Morikawa; Takashi Shiina; Yoshinori Toyoshima
Journal:  FEBS Lett       Date:  2002-04-10       Impact factor: 4.124

4.  An Arabidopsis sigma factor (SIG2)-dependent expression of plastid-encoded tRNAs in chloroplasts.

Authors:  K Kanamaru; A Nagashima; M Fujiwara; H Shimada; Y Shirano; K Nakabayashi; D Shibata; K Tanaka; H Takahashi
Journal:  Plant Cell Physiol       Date:  2001-10       Impact factor: 4.927

Review 5.  Functional modulation of Escherichia coli RNA polymerase.

Authors:  A Ishihama
Journal:  Annu Rev Microbiol       Date:  2000       Impact factor: 15.500

6.  Analysis of barley chloroplast psbD light-responsive promoter elements in transplastomic tobacco.

Authors:  K E Thum; M Kim; D T Morishige; C Eibl; H U Koop; J E Mullet
Journal:  Plant Mol Biol       Date:  2001-10       Impact factor: 4.076

7.  Characterization of Arabidopsis plastid sigma-like transcription factors SIG1, SIG2 and SIG3.

Authors:  Isabelle Privat; Mohamed-Ali Hakimi; Laurence Buhot; Jean-Jacques Favory; Silva Mache-Lerbs
Journal:  Plant Mol Biol       Date:  2003-02       Impact factor: 4.076

8.  PP7 is a positive regulator of blue light signaling in Arabidopsis.

Authors:  Simon G Møller; Youn-Sung Kim; Tim Kunkel; Nam-Hai Chua
Journal:  Plant Cell       Date:  2003-05       Impact factor: 11.277

9.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

10.  AtSig5 is an essential nucleus-encoded Arabidopsis sigma-like factor.

Authors:  Junlan Yao; Sanchita Roy-Chowdhury; Lori A Allison
Journal:  Plant Physiol       Date:  2003-04-24       Impact factor: 8.340

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  50 in total

1.  Chloroplast biogenesis: control of plastid development, protein import, division and inheritance.

Authors:  Wataru Sakamoto; Shin-Ya Miyagishima; Paul Jarvis
Journal:  Arabidopsis Book       Date:  2008-07-22

2.  Eukaryotic-type plastid nucleoid protein pTAC3 is essential for transcription by the bacterial-type plastid RNA polymerase.

Authors:  Yusuke Yagi; Yoko Ishizaki; Yoichi Nakahira; Yuzuru Tozawa; Takashi Shiina
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-23       Impact factor: 11.205

3.  Motif analysis unveils the possible co-regulation of chloroplast genes and nuclear genes encoding chloroplast proteins.

Authors:  Ying Wang; Jun Ding; Henry Daniell; Haiyan Hu; Xiaoman Li
Journal:  Plant Mol Biol       Date:  2012-06-26       Impact factor: 4.076

4.  Function of plastid sigma factors in higher plants: regulation of gene expression or just preservation of constitutive transcription?

Authors:  Silva Lerbs-Mache
Journal:  Plant Mol Biol       Date:  2010-11-25       Impact factor: 4.076

5.  COP1-mediated degradation of BBX22/LZF1 optimizes seedling development in Arabidopsis.

Authors:  Chiung-Swey Joanne Chang; Julin N Maloof; Shu-Hsing Wu
Journal:  Plant Physiol       Date:  2011-03-22       Impact factor: 8.340

6.  Differential expression on a daily basis of plastid sigma factor genes from the moss Physcomitrella patens. Regulatory interactions among PpSig5, the circadian clock, and blue light signaling mediated by cryptochromes.

Authors:  Kazuhiro Ichikawa; Mamoru Sugita; Takato Imaizumi; Masamitsu Wada; Setsuyuki Aoki
Journal:  Plant Physiol       Date:  2004-11-24       Impact factor: 8.340

7.  ATAB2 is a novel factor in the signalling pathway of light-controlled synthesis of photosystem proteins.

Authors:  Frédy Barneche; Veronika Winter; Michèle Crèvecoeur; Jean-David Rochaix
Journal:  EMBO J       Date:  2006-11-30       Impact factor: 11.598

Review 8.  Plant sigma factors and their role in plastid transcription.

Authors:  Eugene A Lysenko
Journal:  Plant Cell Rep       Date:  2007-03-14       Impact factor: 4.570

9.  Evolutionary rewiring: a modified prokaryotic gene-regulatory pathway in chloroplasts.

Authors:  Sujith Puthiyaveetil; Iskander M Ibrahim; John F Allen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-06-10       Impact factor: 6.237

10.  Cryptochrome-1-dependent execution of programmed cell death induced by singlet oxygen in Arabidopsis thaliana.

Authors:  Antoine Danon; Núria Sánchez Coll; Klaus Apel
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-30       Impact factor: 11.205

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