Literature DB >> 12238593

Determination of residual dipolar couplings in homonuclear MOCCA-SIAM experiments.

Andreas Möglich1, Michael Wenzler, Frank Kramer, Steffen J Glaser, Eike Brunner.   

Abstract

In solutions with partial molecular alignment, anisotropic magnetic interactions such as the chemical shift anisotropy, the electric quadrupole interaction, and the magnetic dipole-dipole interaction are no longer averaged out to zero in contrast to isotropic solutions. The resulting residual anisotropic magnetic interactions are increasingly used in biological NMR studies for the determination of 3D structures of proteins and other biomolecules. In the present paper we propose a new approach allowing the measurement of residual HN-H(alpha) dipolar couplings of non-isotope enriched proteins based on the application of the MOCCA-SIAM experiment. This experiment allows the measurement of homonuclear coupling constants with an accuracy of ca. +/- 0.2 Hz and is therefore particularly well suited to determine residual dipolar couplings at relatively low degrees of molecular orientation. The agreement between experimentally determined residual HN-H(alpha) couplings and calculated values is demonstrated for BPTI.

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Year:  2002        PMID: 12238593     DOI: 10.1023/a:1019841602348

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  19 in total

1.  Molecular alignment of proteins in bicellar solutions: quantitative evaluation of effects induced in 2D COSY spectra.

Authors:  E Brunner; J Ogle; M Wenzler; H R Kalbitzer
Journal:  Biochem Biophys Res Commun       Date:  2000-06-16       Impact factor: 3.575

2.  Measurement of homonuclear proton couplings from regular 2D COSY spectra.

Authors:  F Delaglio; Z Wu; A Bax
Journal:  J Magn Reson       Date:  2001-04       Impact factor: 2.229

3.  De novo structure determination from residual dipolar couplings by NMR spectroscopy.

Authors:  Bernd Simon; Michael Sattler
Journal:  Angew Chem Int Ed Engl       Date:  2002-02-01       Impact factor: 15.336

4.  NMR experiments for the sign determination of homonuclear scalar and residual dipolar couplings.

Authors:  G Otting; M Rückert; M H Levitt; A Moshref
Journal:  J Biomol NMR       Date:  2000-04       Impact factor: 2.835

5.  Structure of form III crystals of bovine pancreatic trypsin inhibitor.

Authors:  A Wlodawer; J Nachman; G L Gilliland; W Gallagher; C Woodward
Journal:  J Mol Biol       Date:  1987-12-05       Impact factor: 5.469

6.  Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteins.

Authors:  D Marion; K Wüthrich
Journal:  Biochem Biophys Res Commun       Date:  1983-06-29       Impact factor: 3.575

7.  Order matrix analysis of residual dipolar couplings using singular value decomposition.

Authors:  J A Losonczi; M Andrec; M W Fischer; J H Prestegard
Journal:  J Magn Reson       Date:  1999-06       Impact factor: 2.229

8.  Tunable alignment of macromolecules by filamentous phage yields dipolar coupling interactions.

Authors:  M R Hansen; L Mueller; A Pardi
Journal:  Nat Struct Biol       Date:  1998-12

9.  Characterization of magnetically oriented phospholipid micelles for measurement of dipolar couplings in macromolecules.

Authors:  M Ottiger; A Bax
Journal:  J Biomol NMR       Date:  1998-10       Impact factor: 2.835

10.  Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease.

Authors:  L E Kay; D A Torchia; A Bax
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

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  1 in total

1.  High-temperature solution NMR structure of TmCsp.

Authors:  Astrid Jung; Christian Bamann; Werner Kremer; Hans Robert Kalbitzer; Eike Brunner
Journal:  Protein Sci       Date:  2004-02       Impact factor: 6.725

  1 in total

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