Literature DB >> 1472835

On the potential of simple repetitive DNA for fingerprinting in clinical, forensic, and evolutionary dynamic studies.

J T Epplen1, G Melmer, P Schmidt, L Roewer, J Hundrieser, C Epplen, J Buitkamp.   

Abstract

The purpose of this review is to discuss critically the practical meaning of a specific genome component, simple repetitive desoxyribonucleic acid (DNA) sequences as clinical and forensic and diagnostic and research tools. Previously, multilocus DNA fingerprinting was the major technology employed to visualize such simple repeat sequences. This technique enables many polymorphic loci to be simultaneously detected thus yielding vast amounts of information. With the advent of enzymatic DNA amplification via the polymerase chain reaction (PCR), individual simple repeat loci can be demonstrated, theoretically even from single DNA molecules and so a wealth of additional approaches have also become feasible. In general investigating, small, known, single copy parts of genomes have not posed truly insurmountable problems if enough material was available. There have even been a few (anecdotal) reports on the amplification of simple repeats from ancient DNA (see, e.g. [30]. Here we would like to after a solid basis for an earnest discussion of the applications of these simple repetitive sequences using various methodological approaches relevant for clinical diagnosis, setting aside the obvious unsolved mysteries of their biology.

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Year:  1992        PMID: 1472835     DOI: 10.1007/bf00180316

Source DB:  PubMed          Journal:  Clin Investig        ISSN: 0941-0198


  36 in total

1.  The human cDNA sequence homologous to the mouse MHC class I promoter-binding protein gene contains four additional codons in lymphocytes.

Authors:  C Epplen; J T Epplen
Journal:  Mamm Genome       Date:  1992       Impact factor: 2.957

2.  A gel retardation assay system for studying protein binding to simple repetitive DNA sequences.

Authors:  W Mäueler; M Muller; A C Köhne; J T Epplen
Journal:  Electrophoresis       Date:  1992 Jan-Feb       Impact factor: 3.535

3.  Rapid and sensitive typing of forensic stains by PCR amplification of polymorphic simple repeat sequences in case work.

Authors:  L Roewer; J T Epplen
Journal:  Forensic Sci Int       Date:  1992-03       Impact factor: 2.395

4.  Hypervariability of intronic simple (gt)n(ga)m repeats in HLA-DRB genes.

Authors:  O Riess; C Kammerbauer; L Roewer; V Steimle; A Andreas; E Albert; T Nagai; J T Epplen
Journal:  Immunogenetics       Date:  1990       Impact factor: 2.846

Review 5.  On simple repeated GATCA sequences in animal genomes: a critical reappraisal.

Authors:  J T Epplen
Journal:  J Hered       Date:  1988 Nov-Dec       Impact factor: 2.645

6.  Clustering of hypervariable minisatellites in the proterminal regions of human autosomes.

Authors:  N J Royle; R E Clarkson; Z Wong; A J Jeffreys
Journal:  Genomics       Date:  1988-11       Impact factor: 5.736

7.  Hypervariable 'minisatellite' regions in human DNA.

Authors:  A J Jeffreys; V Wilson; S L Thein
Journal:  Nature       Date:  1985 Mar 7-13       Impact factor: 49.962

8.  The efficiency of multilocus DNA fingerprint probes for individualization and establishment of family relationships, determined from extensive casework.

Authors:  A J Jeffreys; M Turner; P Debenham
Journal:  Am J Hum Genet       Date:  1991-05       Impact factor: 11.025

9.  Diagnosis of transfusion-associated graft-versus-host disease by genetic fingerprinting and polymerase chain reaction.

Authors:  E Kunstmann; T Bocker; L Roewer; H Sauer; W Mempel; J T Epplen
Journal:  Transfusion       Date:  1992-10       Impact factor: 3.157

10.  DNA finger printing by oligonucleotide probes specific for simple repeats.

Authors:  S Ali; C R Müller; J T Epplen
Journal:  Hum Genet       Date:  1986-11       Impact factor: 4.132

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  3 in total

1.  Simple repetitive DNA sequences from primates: compilation and analysis.

Authors:  J Jurka; C Pethiyagoda
Journal:  J Mol Evol       Date:  1995-02       Impact factor: 2.395

2.  Chloride conductance and genetic background modulate the cystic fibrosis phenotype of Delta F508 homozygous twins and siblings.

Authors:  I Bronsveld; F Mekus; J Bijman; M Ballmann; H R de Jonge; U Laabs; D J Halley; H Ellemunter; G Mastella; S Thomas; H J Veeze; B Tümmler
Journal:  J Clin Invest       Date:  2001-12       Impact factor: 14.808

3.  Identification of the most represented repeated motifs in Arabidopsis thaliana microsatellite loci.

Authors:  A Depeiges; C Goubely; A Lenoir; S Cocherel; G Picard; M Raynal; F Grellet; M Delseny
Journal:  Theor Appl Genet       Date:  1995-07       Impact factor: 5.699

  3 in total

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