Literature DB >> 14698550

Isotopic compositions and accurate masses of single isotopic peaks.

Alan L Rockwood1, Jordan R Van Orman, David V Dearden.   

Abstract

This paper presents and proves an algorithm to calculate the isotopic composition of individual (nominal) isotopic peaks. From this information one can calculate the accurate masses of isotopic peaks. This opens the way to use accurate mass measurements to determine chemical compositions of compounds using non-mono-isotopic peaks. The algorithm is computationally efficient and rigorously correct in the absence of roundoff error. Highly effective error correction strategies are described to detect and correct computational errors arising in practical calculations. Results from theoretical calculations of isotopic masses for a krypton inclusion complex agreed well with experimental measurements.

Mesh:

Substances:

Year:  2004        PMID: 14698550     DOI: 10.1016/j.jasms.2003.08.011

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  6 in total

1.  Mass measurement errors caused by 'local" frequency perturbations in FTICR mass spectrometry.

Authors:  Christophe Masselon; Aleksey V Tolmachev; Gordon A Anderson; Richard Harkewicz; Richard D Smith
Journal:  J Am Soc Mass Spectrom       Date:  2002-01       Impact factor: 3.109

2.  Dissociation of individual isotopic peaks: predicting isotopic distributions of product ions in MSn.

Authors:  Alan L Rockwood; Mark M Kushnir; Gordon J Nelson
Journal:  J Am Soc Mass Spectrom       Date:  2003-04       Impact factor: 3.109

3.  Determination of monoisotopic masses and ion populations for large biomolecules from resolved isotopic distributions.

Authors:  M W Senko; S C Beu; F W McLaffertycor
Journal:  J Am Soc Mass Spectrom       Date:  1995-04       Impact factor: 3.109

4.  Ultrahigh-speed calculation of isotope distributions.

Authors:  A L Rockwood; S L Van Orden
Journal:  Anal Chem       Date:  1996-07-01       Impact factor: 6.986

5.  A high-performance modular data system for Fourier transform ion cyclotron resonance mass spectrometry.

Authors:  M W Senko; J D Canterbury; S Guan; A G Marshall
Journal:  Rapid Commun Mass Spectrom       Date:  1996       Impact factor: 2.419

6.  Counting individual sulfur atoms in a protein by ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry: experimental resolution of isotopic fine structure in proteins.

Authors:  S D Shi; C L Hendrickson; A G Marshall
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

  6 in total
  14 in total

1.  An efficient method to calculate the aggregated isotopic distribution and exact center-masses.

Authors:  Jürgen Claesen; Piotr Dittwald; Tomasz Burzykowski; Dirk Valkenborg
Journal:  J Am Soc Mass Spectrom       Date:  2012-02-15       Impact factor: 3.109

2.  Software Analysis of Uncorrelated MS1 Peaks for Discovery of Post-Translational Modifications.

Authors:  Bruce D Pascal; Graham M West; Catherina Scharager-Tapia; Ricardo Flefil; Tina Moroni; Pablo Martinez-Acedo; Patrick R Griffin; Anthony C Carvalloza
Journal:  J Am Soc Mass Spectrom       Date:  2015-08-12       Impact factor: 3.109

3.  Efficient calculation of accurate masses of isotopic peaks.

Authors:  Alan L Rockwood; Perttu Haimi
Journal:  J Am Soc Mass Spectrom       Date:  2006-02-03       Impact factor: 3.109

4.  Efficient calculation of exact mass isotopic distributions.

Authors:  Ross K Snider
Journal:  J Am Soc Mass Spectrom       Date:  2007-05-24       Impact factor: 3.109

5.  A hierarchical algorithm for calculating the isotopic fine structures of molecules.

Authors:  Long Li; Joshua A Kresh; N Murat Karabacak; Jennifer S Cobb; Jeffrey N Agar; Pengyu Hong
Journal:  J Am Soc Mass Spectrom       Date:  2008-08-15       Impact factor: 3.109

6.  An algorithm to correct saturated mass spectrometry ion abundances for enhanced quantitation and mass accuracy in omic studies.

Authors:  Aivett Bilbao; Bryson C Gibbons; Gordon W Slysz; Kevin L Crowell; Matthew E Monroe; Yehia M Ibrahim; Richard D Smith; Samuel H Payne; Erin S Baker
Journal:  Int J Mass Spectrom       Date:  2017-11-06       Impact factor: 1.986

7.  Accurate peak list extraction from proteomic mass spectra for identification and profiling studies.

Authors:  Nicola Barbarini; Paolo Magni
Journal:  BMC Bioinformatics       Date:  2010-10-16       Impact factor: 3.169

8.  BRAIN 2.0: time and memory complexity improvements in the algorithm for calculating the isotope distribution.

Authors:  Piotr Dittwald; Dirk Valkenborg
Journal:  J Am Soc Mass Spectrom       Date:  2014-02-12       Impact factor: 3.109

9.  Decoding split and pool combinatorial libraries with electron-transfer dissociation tandem mass spectrometry.

Authors:  Mohosin Sarkar; Bruce D Pascal; Caitlin Steckler; Claudio Aquino; Glenn C Micalizio; Thomas Kodadek; Michael J Chalmers
Journal:  J Am Soc Mass Spectrom       Date:  2013-05-02       Impact factor: 3.109

10.  SIRIUS: decomposing isotope patterns for metabolite identification.

Authors:  Sebastian Böcker; Matthias C Letzel; Zsuzsanna Lipták; Anton Pervukhin
Journal:  Bioinformatics       Date:  2008-11-17       Impact factor: 6.937

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.