Literature DB >> 14694908

A comprehensive radiation hybrid map of bovine Chromosome 26 (BTA26): comparative chromosomal organization between HSA10q and BTA26 and BTA28.

Mathieu Gautier1, Hélène Hayes, André Eggen.   

Abstract

In this study, we present a comprehensive 3000-rad radiation hybrid (RH) map of bovine Chromosome (Chr) 26 (BTA26) with 80 markers including 50 genes or ESTs: 44 have an ortholog mapping to human Chr 10 (HSA10) and 29 to mouse Chr (MMU) 7, 10, and 19. Moreover, 12 other HSA10 genes were integrated in a newly developed RH map of BTA28 (seven represent new assignments). The available draft of the mouse genome allowed us to present a detailed picture of the distribution of conserved synteny segments among the three species (human, cattle, and mouse) and to propose a simple model of the comparative chromosomal organization between the long arm of HSA10 and BTA26 and 28. Finally, the INRA bovine BAC library was screened for most of the BTA26 markers considered in this study to provide anchors for the bovine physical map.

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Year:  2003        PMID: 14694908     DOI: 10.1007/s00335-003-3014-0

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  29 in total

1.  Genomic organization and chromosomal mapping of the bovine Fas/APO-1 gene.

Authors:  J Yoo; R T Stone; S M Kappes; S S Toldo; R Fries; C W Beattie
Journal:  DNA Cell Biol       Date:  1996-05       Impact factor: 3.311

2.  Standardization of cattle karyotype nomenclature: report of the committee for the standardization of the cattle karyotype.

Authors:  C P Popescu; S Long; P Riggs; J Womack; S Schmutz; R Fries; D S Gallagher
Journal:  Cytogenet Cell Genet       Date:  1996

3.  A second-generation linkage map of the bovine genome.

Authors:  S M Kappes; J W Keele; R T Stone; R A McGraw; T S Sonstegard; T P Smith; N L Lopez-Corrales; C W Beattie
Journal:  Genome Res       Date:  1997-03       Impact factor: 9.043

4.  An ordered comparative map of the cattle and human genomes.

Authors:  M R Band; J H Larson; M Rebeiz; C A Green; D W Heyen; J Donovan; R Windish; C Steining; P Mahyuddin; J E Womack; H A Lewin
Journal:  Genome Res       Date:  2000-09       Impact factor: 9.043

5.  Cytogenetic comparison between Vietnamese sika deer and cattle: R-banded karyotypes and FISH mapping.

Authors:  A Bonnet; S Thévenon; F Claro; M Gautier; H Hayes
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

6.  Construction of a mouse whole-genome radiation hybrid panel and application to MMU11.

Authors:  K Schmitt; J W Foster; R W Feakes; C Knights; M E Davis; D J Spillett; P N Goodfellow
Journal:  Genomics       Date:  1996-06-01       Impact factor: 5.736

7.  A bovine whole-genome radiation hybrid panel and outline map.

Authors:  John L Williams; André Eggen; Luca Ferretti; Christine J Farr; Mathieu Gautier; Giuseppe Amati; Glynn Ball; Tiziana Caramorr; Ricky Critcher; Sandro Costa; Patrick Hextall; David Hills; Aurore Jeulin; Susanna L Kiguwa; Olivia Ross; Angela L Smith; Katiana Saunier; Barbara Urquhart; Dave Waddington
Journal:  Mamm Genome       Date:  2002-08       Impact factor: 2.957

8.  Chromosome painting with human chromosome-specific DNA libraries reveals the extent and distribution of conserved segments in bovine chromosomes.

Authors:  H Hayes
Journal:  Cytogenet Cell Genet       Date:  1995

9.  A physical map of the mouse genome.

Authors:  Simon G Gregory; Mandeep Sekhon; Jacqueline Schein; Shaying Zhao; Kazutoyo Osoegawa; Carol E Scott; Richard S Evans; Paul W Burridge; Tony V Cox; Christopher A Fox; Richard D Hutton; Ian R Mullenger; Kimbly J Phillips; James Smith; Jim Stalker; Glen J Threadgold; Ewan Birney; Kristine Wylie; Asif Chinwalla; John Wallis; LaDeana Hillier; Jason Carter; Tony Gaige; Sara Jaeger; Colin Kremitzki; Dan Layman; Jason Maas; Rebecca McGrane; Kelly Mead; Rebecca Walker; Steven Jones; Michael Smith; Jennifer Asano; Ian Bosdet; Susanna Chan; Suganthi Chittaranjan; Readman Chiu; Chris Fjell; Dan Fuhrmann; Noreen Girn; Catharine Gray; Ran Guin; Letticia Hsiao; Martin Krzywinski; Reta Kutsche; Soo Sen Lee; Carrie Mathewson; Candice McLeavy; Steve Messervier; Steven Ness; Pawan Pandoh; Anna-Liisa Prabhu; Parvaneh Saeedi; Duane Smailus; Lorraine Spence; Jeff Stott; Sheryl Taylor; Wesley Terpstra; Miranda Tsai; Jill Vardy; Natasja Wye; George Yang; Sofiya Shatsman; Bola Ayodeji; Keita Geer; Getahun Tsegaye; Alla Shvartsbeyn; Elizabeth Gebregeorgis; Margaret Krol; Daniel Russell; Larry Overton; Joel A Malek; Mike Holmes; Michael Heaney; Jyoti Shetty; Tamara Feldblyum; William C Nierman; Joseph J Catanese; Tim Hubbard; Robert H Waterston; Jane Rogers; Pieter J de Jong; Claire M Fraser; Marco Marra; John D McPherson; David R Bentley
Journal:  Nature       Date:  2002-08-04       Impact factor: 49.962

10.  Comparative gene mapping: a fine-scale survey of chromosome rearrangements between ruminants and humans.

Authors:  L Schibler; D Vaiman; A Oustry; C Giraud-Delville; E P Cribiu
Journal:  Genome Res       Date:  1998-09       Impact factor: 9.043

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  3 in total

1.  Fine mapping and physical characterization of two linked quantitative trait loci affecting milk fat yield in dairy cattle on BTA26.

Authors:  Mathieu Gautier; Rosa Roy Barcelona; Sébastien Fritz; Cécile Grohs; Tom Druet; Didier Boichard; André Eggen; Theo H E Meuwissen
Journal:  Genetics       Date:  2005-09-19       Impact factor: 4.562

2.  Cloning of the bovine prion-like Shadoo (SPRN) gene by comparative analysis of the predicted genomic locus.

Authors:  Cristina Uboldi; Marianna Paulis; Elena Guidi; Anna Bertoni; Giulia Pia Di Meo; Angela Perucatti; Leopoldo Iannuzzi; Elena Raimondi; Ronald M Brunner; André Eggen; Luca Ferretti
Journal:  Mamm Genome       Date:  2006-11-07       Impact factor: 2.957

3.  A high-resolution radiation hybrid map of chicken chromosome 5 and comparison with human chromosomes.

Authors:  Frédérique Pitel; Behnam Abasht; Mireille Morisson; Richard P M A Crooijmans; Florence Vignoles; Sophie Leroux; Katia Feve; Suzanne Bardes; Denis Milan; Sandrine Lagarrigue; Martien A M Groenen; Madeleine Douaire; Alain Vignal
Journal:  BMC Genomics       Date:  2004-09-15       Impact factor: 3.969

  3 in total

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