Literature DB >> 14691225

Thermostability of multidomain proteins: elongation factors EF-Tu from Escherichia coli and Bacillus stearothermophilus and their chimeric forms.

Hana Sanderová1, Marta Hůlková, Petr Malon, Markéta Kepková, Jirí Jonák.   

Abstract

Recombinant mesophilic Escherichia coli (Ec) and thermophilic Bacillus stearothermophilus (Bst) elongation factors EF-Tus, their isolated G-domains, and six chimeric EF-Tus composed of domains of either EF-Tu were prepared, and their GDP/GTP binding activities and thermostability were characterized. BstEF-Tu and BstG-domain bound GDP and GTP with affinities in nanomolar and submicromolar ranges, respectively, fully comparable with those of EcEF-Tu. In contrast, the EcG-domain bound the nucleotides with much lower, micromolar affinities. The exchange of domains 2 and 3 had essentially no effect on the GDP-binding activity; all complexes of chimeric EF-Tus with GDP retained K(d) values in the nanomolar range. The final thermostability level of either EF-Tu was the result of a cooperative interaction between the G-domains and domains 2 + 3. The G-domains set up a "basic" level of the thermostability, which was approximately 20 degrees C higher with the BstG-domain than with the EcG-domain. This correlated with the growth temperature optimum difference of both bacteria and two distinct thermostabilization features of the BstG-domain: an increase of charged residues at the expense of polar uncharged residues (CvP bias), and a decrease in the nonpolar solvent-accessible surface area. Domains 2 + 3 contributed by further stabilization of alpha-helical regions and, in turn, the functions of the G-domains to the level of the respective growth temperature optima. Their contributions were similar irrespective of their origin but, with Ecdomains 2 + 3, dependent on the guanine nucleotide binding state. It was lower in the GTP conformation, and the mechanism involved the destabilization of the alpha-helical regions of the G-domain by Ecdomain 2.

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Year:  2004        PMID: 14691225      PMCID: PMC2286523          DOI: 10.1110/ps.03272504

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  36 in total

1.  Isolation of chimaeric forms of elongation factor EF-Tu by affinity chromatography.

Authors:  Hana Tomincová; Libor Krásný; Jirí Jonák
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2002-04-25       Impact factor: 3.205

2.  Genomic correlates of hyperthermostability, an update.

Authors:  Karsten Suhre; Jean-Michel Claverie
Journal:  J Biol Chem       Date:  2003-02-24       Impact factor: 5.157

3.  Properties of truncated forms of the elongation factor 1alpha from the archaeon Sulfolobus solfataricus.

Authors:  M Masullo; G Ianniciello; P Arcari; V Bocchini
Journal:  Eur J Biochem       Date:  1997-01-15

4.  Investigation of functional aspects of the N-terminal region of elongation factor Tu from Escherichia coli using a protein engineering approach.

Authors:  M Laurberg; F Mansilla; B F Clark; C R Knudsen
Journal:  J Biol Chem       Date:  1998-02-20       Impact factor: 5.157

5.  Studies on the polypeptide elongation factors from E. coli. V. Properties of various complexes containing EF-Tu and EF-Ts.

Authors:  K Arai; M Kawakita; Y Kaziro
Journal:  J Biochem       Date:  1974-08       Impact factor: 3.387

6.  Study of conditions for the inhibitory effect of N-tosyl-L-phenylalanylchloromethane on protein synthesis and the possibility of existence of different forms of the elongation factor S3 in Bacillus stearothermophilus.

Authors:  J Jonák; I Rychlík
Journal:  Biochim Biophys Acta       Date:  1973-11-14

7.  Evidence for conformational changes in elongation factor Tu induced by GTP and GDP.

Authors:  M P Printz; D L Miller
Journal:  Biochem Biophys Res Commun       Date:  1973-07-02       Impact factor: 3.575

8.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

9.  Structure and expression of elongation factor Tu from Bacillus stearothermophilus.

Authors:  L Krásný; J R Mesters; L N Tieleman; B Kraal; V Fucík; R Hilgenfeld; J Jonák
Journal:  J Mol Biol       Date:  1998-10-23       Impact factor: 5.469

10.  Characterization of the elongation factors from calf brain. 2. Functional properties of EF-1 alpha, the action of physiological ligands and kirromycin.

Authors:  J B Crechet; A Parmeggiani
Journal:  Eur J Biochem       Date:  1986-12-15
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  8 in total

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2.  Explanation of the stability of thermophilic proteins based on unique micromorphology.

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3.  Guanine nucleotide exchange factor independence of the G-protein eEF1A through novel mutant forms and biochemical properties.

Authors:  Sedide B Ozturk; Terri Goss Kinzy
Journal:  J Biol Chem       Date:  2008-06-18       Impact factor: 5.157

4.  Structural and Dynamics Comparison of Thermostability in Ancient, Modern, and Consensus Elongation Factor Tus.

Authors:  C Denise Okafor; Manish C Pathak; Crystal E Fagan; Nicholas C Bauer; Megan F Cole; Eric A Gaucher; Eric A Ortlund
Journal:  Structure       Date:  2017-12-21       Impact factor: 5.006

5.  Are coarse-grained models apt to detect protein thermal stability? The case of OPEP force field.

Authors:  Maria Kalimeri; Philippe Derreumaux; Fabio Sterpone
Journal:  J Non Cryst Solids       Date:  2014-07-22       Impact factor: 3.531

6.  Interface matters: the stiffness route to stability of a thermophilic tetrameric malate dehydrogenase.

Authors:  Maria Kalimeri; Eric Girard; Dominique Madern; Fabio Sterpone
Journal:  PLoS One       Date:  2014-12-01       Impact factor: 3.240

7.  Immunoproteomic analysis of outer membrane proteins and extracellular proteins of Actinobacillus pleuropneumoniae JL03 serotype 3.

Authors:  Yonghong Liao; Junhua Deng; Anding Zhang; Mingguang Zhou; Yong Hu; Huanchun Chen; Meilin Jin
Journal:  BMC Microbiol       Date:  2009-08-20       Impact factor: 3.605

Review 8.  Experimental evolution of protein-protein interaction networks.

Authors:  Betül Kaçar; Eric A Gaucher
Journal:  Biochem J       Date:  2013-08-01       Impact factor: 3.857

  8 in total

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