Literature DB >> 14689188

High-resolution genetic mapping of the leaf stripe resistance gene Rdg2a in barley.

D Bulgarelli1, N C Collins, G Tacconi, E Dellaglio, R Brueggeman, A Kleinhofs, A M Stanca, G Valè.   

Abstract

The dominant gene Rdg2a of barley conferring resistance to the hemi-biotrophic seed-borne pathogen Pyrenophora graminea is located in the distal region of chromosome arm 1 (7H)S. As the first step towards isolating the gene, a high-resolution genetic map of the region was constructed using an F(2) population of 1,400 plants (Thibaut Rdg2axMirco). The map included six classes of resistance gene analogues (RGAs) tightly associated with Rdg2a. Rdg2a was delimited to a genetic interval of 0.14 cM between the RGAs ssCH4 and MWG851. Additional markers were generated using the sequence from the corresponding region on rice chromosome 6, allowing delimitation of the Rdg2a syntenic interval in rice to a 115 kbp stretch of sequence. Analysis of the rice sequence failed to reveal any genes with similarity to characterized resistance genes. Therefore, either the rice-barley synteny is disrupted in this region, or Rdg2a encodes a novel type of resistance protein.

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Year:  2003        PMID： 14689188     DOI： 10.1007/s00122-003-1557-9

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN： 0040-5752            Impact factor:   5.699


  28 in total

1.  The Mla (powdery mildew) resistance cluster is associated with three NBS-LRR gene families and suppressed recombination within a 240-kb DNA interval on chromosome 5S (1HS) of barley.

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Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

Review 2.  Plant pathogens and integrated defence responses to infection.

Authors:  J L Dangl; J D Jones
Journal:  Nature       Date:  2001-06-14       Impact factor: 49.962

Review 3.  Deciphering plant-pathogen communication: fresh perspectives for molecular resistance breeding.

Authors:  Kim E Hammond-Kosack; Jane E Parker
Journal:  Curr Opin Biotechnol       Date:  2003-04       Impact factor: 9.740

4.  Rapid reorganization of resistance gene homologues in cereal genomes.

Authors:  D Leister; J Kurth; D A Laurie; M Yano; T Sasaki; K Devos; A Graner; P Schulze-Lefert
Journal:  Proc Natl Acad Sci U S A       Date:  1998-01-06       Impact factor: 11.205

5.  Towards map-based cloning of the barley stem rust resistance genes Rpg1 and rpg4 using rice as an intergenomic cloning vehicle.

Authors:  A Kilian; J Chen; F Han; B Steffenson; A Kleinhofs
Journal:  Plant Mol Biol       Date:  1997-09       Impact factor: 4.076

6.  A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1983-07-01       Impact factor: 3.365

7.  A draft sequence of the rice genome (Oryza sativa L. ssp. japonica).

Authors:  Stephen A Goff; Darrell Ricke; Tien-Hung Lan; Gernot Presting; Ronglin Wang; Molly Dunn; Jane Glazebrook; Allen Sessions; Paul Oeller; Hemant Varma; David Hadley; Don Hutchison; Chris Martin; Fumiaki Katagiri; B Markus Lange; Todd Moughamer; Yu Xia; Paul Budworth; Jingping Zhong; Trini Miguel; Uta Paszkowski; Shiping Zhang; Michelle Colbert; Wei-lin Sun; Lili Chen; Bret Cooper; Sylvia Park; Todd Charles Wood; Long Mao; Peter Quail; Rod Wing; Ralph Dean; Yeisoo Yu; Andrey Zharkikh; Richard Shen; Sudhir Sahasrabudhe; Alun Thomas; Rob Cannings; Alexander Gutin; Dmitry Pruss; Julia Reid; Sean Tavtigian; Jeff Mitchell; Glenn Eldredge; Terri Scholl; Rose Mary Miller; Satish Bhatnagar; Nils Adey; Todd Rubano; Nadeem Tusneem; Rosann Robinson; Jane Feldhaus; Teresita Macalma; Arnold Oliphant; Steven Briggs
Journal:  Science       Date:  2002-04-05       Impact factor: 47.728

8.  Barley disease resistance gene analogs of the NBS-LRR class: identification and mapping.

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Journal:  Mol Genet Genomics       Date:  2003-03-05       Impact factor: 3.291

9.  Rice-barley synteny and its application to saturation mapping of the barley Rpg1 region.

Authors:  A Kilian; D A Kudrna; A Kleinhofs; M Yano; N Kurata; B Steffenson; T Sasaki
Journal:  Nucleic Acids Res       Date:  1995-07-25       Impact factor: 16.971

10.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736
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  12 in total

1.  The use of high resolution melting (HRM) to map single nucleotide polymorphism markers linked to a covered smut resistance gene in barley.

Authors:  Anke Lehmensiek; Mark W Sutherland; Raymond B McNamara
Journal:  Theor Appl Genet       Date:  2008-06-13       Impact factor: 5.699

2.  Resistance to powdery mildew in Spanish barley landraces is controlled by different sets of quantitative trait loci.

Authors:  C Silvar; A M Casas; E Igartua; L J Ponce-Molina; M P Gracia; G Schweizer; M Herz; K Flath; R Waugh; D Kopahnke; F Ordon
Journal:  Theor Appl Genet       Date:  2011-07-08       Impact factor: 5.699

3.  High-resolution mapping and mutation analysis separate the rust resistance genes Sr31, Lr26 and Yr9 on the short arm of rye chromosome 1.

Authors:  R Mago; H Miah; G J Lawrence; C R Wellings; W Spielmeyer; H S Bariana; R A McIntosh; A J Pryor; J G Ellis
Journal:  Theor Appl Genet       Date:  2005-11-08       Impact factor: 5.699

4.  Variation in crossover rates across a 3-Mb contig of bread wheat (Triticum aestivum) reveals the presence of a meiotic recombination hotspot.

Authors:  Cyrille Saintenac; Sébastien Faure; Arnaud Remay; Frédéric Choulet; Catherine Ravel; Etienne Paux; François Balfourier; Catherine Feuillet; Pierre Sourdille
Journal:  Chromosoma       Date:  2010-12-16       Impact factor: 4.316

5.  Fine mapping and comparative genomics integration of two quantitative trait loci controlling resistance to powdery mildew in a Spanish barley landrace.

Authors:  Cristina Silvar; Dragan Perovic; Uwe Scholz; Ana M Casas; Ernesto Igartua; Frank Ordon
Journal:  Theor Appl Genet       Date:  2011-09-08       Impact factor: 5.699

6.  Haplotype variability and identification of new functional alleles at the Rdg2a leaf stripe resistance gene locus.

Authors:  Chiara Biselli; Simona Urso; Gianni Tacconi; Burkhard Steuernagel; Daniela Schulte; Alberto Gianinetti; Paolo Bagnaresi; Nils Stein; Luigi Cattivelli; Giampiero Valè
Journal:  Theor Appl Genet       Date:  2013-03-15       Impact factor: 5.699

7.  The CC-NB-LRR-type Rdg2a resistance gene confers immunity to the seed-borne barley leaf stripe pathogen in the absence of hypersensitive cell death.

Authors:  Davide Bulgarelli; Chiara Biselli; Nicholas C Collins; Gabriella Consonni; Antonio M Stanca; Paul Schulze-Lefert; Giampiero Valè
Journal:  PLoS One       Date:  2010-09-10       Impact factor: 3.240

8.  Genetic and physical mapping of a high recombination region on chromosome 7H(1) in barley.

Authors:  Tom Drader; Kara Johnson; Robert Brueggeman; Dave Kudrna; Andris Kleinhofs
Journal:  Theor Appl Genet       Date:  2009-01-13       Impact factor: 5.699

9.  Identification and mapping of the leaf stripe resistance gene Rdg1a in Hordeum spontaneum.

Authors:  Chiara Biselli; Simona Urso; Letizia Bernardo; Alessandro Tondelli; Gianni Tacconi; Valentina Martino; Stefania Grando; Giampiero Valè
Journal:  Theor Appl Genet       Date:  2009-12-30       Impact factor: 5.699

10.  The gene conferring susceptibility to spot blotch caused by Cochliobolus sativus is located at the Mla locus in barley cultivar Bowman.

Authors:  Yueqiang Leng; Mingxia Zhao; Rui Wang; Brian J Steffenson; Robert S Brueggeman; Shaobin Zhong
Journal:  Theor Appl Genet       Date:  2018-04-16       Impact factor: 5.699
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