Literature DB >> 14681832

Evidence for extensive transmission distortion in the human genome.

Sebastian Zöllner1, Xiaoquan Wen, Neil A Hanchard, Mark A Herbert, Carole Ober, Jonathan K Pritchard.   

Abstract

It is a basic principle of genetics that each chromosome is transmitted from parent to offspring with a probability that is given by Mendel's laws. However, several known biological processes lead to skewed transmission probabilities among surviving offspring and, therefore, to excess genetic sharing among relatives. Examples include in utero selection against deleterious mutations, meiotic drive, and maternal-fetal incompatibility. Although these processes affect our basic understanding of inheritance, little is known about their overall impact in humans or other mammals. In this study, we examined genome screen data from 148 nuclear families, collected without reference to phenotype, to look for departures from Mendelian transmission proportions. Using single-point and multipoint linkage analysis, we detected a modest but significant genomewide shift towards excess genetic sharing among siblings (average sharing of 50.43% for the autosomes; P=.009). Our calculations indicate that many loci with skewed transmission are required to produce a genomewide shift of this magnitude. Since transmission distortion loci are subject to strong selection, this raises interesting questions about the evolutionary forces that keep them polymorphic. Finally, our results also have implications for mapping disease genes and for the genetics of fertility.

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Year:  2003        PMID: 14681832      PMCID: PMC1181913          DOI: 10.1086/381131

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  33 in total

1.  Transmission ratio distortion at the INS-IGF2 VNTR.

Authors:  I A Eaves; S T Bennett; P Forster; K M Ferber; D Ehrmann; A J Wilson; S Bhattacharyya; A G Ziegler; B Brinkmann; J A Todd
Journal:  Nat Genet       Date:  1999-08       Impact factor: 38.330

2.  Segregation distortion of the CTG repeats at the myotonic dystrophy locus.

Authors:  R Chakraborty; D N Stivers; R Deka; L M Yu; M D Shriver; R E Ferrell
Journal:  Am J Hum Genet       Date:  1996-07       Impact factor: 11.025

Review 3.  Why is Mendelian segregation so exact?

Authors:  J F Crow
Journal:  Bioessays       Date:  1991-06       Impact factor: 4.345

4.  Parametric and nonparametric linkage analysis: a unified multipoint approach.

Authors:  L Kruglyak; M J Daly; M P Reeve-Daly; E S Lander
Journal:  Am J Hum Genet       Date:  1996-06       Impact factor: 11.025

Review 5.  HLA and pregnancy: the paradox of the fetal allograft.

Authors:  C Ober
Journal:  Am J Hum Genet       Date:  1998-01       Impact factor: 11.025

6.  Parental origin-dependent, male offspring-specific transmission-ratio distortion at loci on the human X chromosome.

Authors:  A K Naumova; M Leppert; D F Barker; K Morgan; C Sapienza
Journal:  Am J Hum Genet       Date:  1998-06       Impact factor: 11.025

7.  Genetic analysis of idiopathic torsion dystonia in Ashkenazi Jews and their recent descent from a small founder population.

Authors:  N Risch; D de Leon; L Ozelius; P Kramer; L Almasy; B Singer; S Fahn; X Breakefield; S Bressman
Journal:  Nat Genet       Date:  1995-02       Impact factor: 38.330

Review 8.  Cheaters sometimes prosper: distortion of mendelian segregation by meiotic drive.

Authors:  T W Lyttle
Journal:  Trends Genet       Date:  1993-06       Impact factor: 11.639

9.  Dynamic balance of segregation distortion and selection maintains normal allele sizes at the myotonic dystrophy locus.

Authors:  A Polański; R Chakraborty; M Kimmel; R Deka
Journal:  Math Biosci       Date:  1998-01-01       Impact factor: 2.144

10.  Genetic linkage of cone-rod retinal dystrophy to chromosome 19q and evidence for segregation distortion.

Authors:  K Evans; A Fryer; C Inglehearn; J Duvall-Young; J L Whittaker; C Y Gregory; R Butler; N Ebenezer; D M Hunt; S Bhattacharya
Journal:  Nat Genet       Date:  1994-02       Impact factor: 38.330

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  39 in total

1.  Transmission-ratio distortion and allele sharing in affected sib pairs: a new linkage statistic with reduced bias, with application to chromosome 6q25.3.

Authors:  Mathieu Lemire; Nicole M Roslin; Catherine Laprise; Thomas J Hudson; Kenneth Morgan
Journal:  Am J Hum Genet       Date:  2004-08-20       Impact factor: 11.025

2.  Mathematical assumptions versus biological reality: myths in affected sib pair linkage analysis.

Authors:  Robert C Elston; Danhong Song; Sudha K Iyengar
Journal:  Am J Hum Genet       Date:  2004-11-11       Impact factor: 11.025

3.  Scrambling eggs: meiotic drive and the evolution of female recombination rates.

Authors:  Yaniv Brandvain; Graham Coop
Journal:  Genetics       Date:  2011-12-05       Impact factor: 4.562

4.  Detection of intergenerational genetic effects with application to HLA-B matching as a risk factor for schizophrenia.

Authors:  Erica J Childs; Eric M Sobel; Christina G S Palmer; Janet S Sinsheimer
Journal:  Hum Hered       Date:  2011-10-15       Impact factor: 0.444

5.  Analysis of case-parent trios for imprinting effect using a loglinear model with adjustment for sex-of-parent-specific transmission ratio distortion.

Authors:  Lam Opal Huang; Claire Infante-Rivard; Aurélie Labbe
Journal:  Hum Genet       Date:  2017-06-19       Impact factor: 4.132

6.  HLA and genomewide allele sharing in dizygotic twins.

Authors:  Grant W Montgomery; Gu Zhu; Jouke Jan Hottenga; David L Duffy; Andrew C Heath; Dorret I Boomsma; Nicholas G Martin; Peter M Visscher
Journal:  Am J Hum Genet       Date:  2006-10-23       Impact factor: 11.025

7.  Variance calculations for identity-by-descent estimation.

Authors:  Matthew B McQueen; Deborah Blacker; Nan M Laird
Journal:  Am J Hum Genet       Date:  2006-03-29       Impact factor: 11.025

Review 8.  Genetic epidemiology of type 1 diabetes.

Authors:  Andrew D Paterson
Journal:  Curr Diab Rep       Date:  2006-04       Impact factor: 4.810

Review 9.  Selfish genetic elements and sexual selection: their impact on male fertility.

Authors:  Tom A R Price; Nina Wedell
Journal:  Genetica       Date:  2008-03-08       Impact factor: 1.082

Review 10.  Transmission ratio distortion: review of concept and implications for genetic association studies.

Authors:  Lam Opal Huang; Aurélie Labbe; Claire Infante-Rivard
Journal:  Hum Genet       Date:  2012-12-15       Impact factor: 4.132

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