Literature DB >> 14675551

Structure and mechanism of bacterial dehalogenases: different ways to cleave a carbon-halogen bond.

René M de Jong1, Bauke W Dijkstra.   

Abstract

The dehalogenases make use of fundamentally different strategies to cleave carbon-halogen bonds. The structurally characterized haloalkane dehalogenases, haloacid dehalogenases and 4-chlorobenzoate-coenzyme A dehalogenases use substitution mechanisms that proceed via a covalent aspartyl intermediate. Recent X-ray crystallographic analysis of a haloalcohol dehalogenase and a trans-3-chloroacrylic acid dehalogenase has provided detailed insight into a different intramolecular substitution mechanism and a hydratase-like mechanism, respectively. The available information on the various dehalogenases supports different views on the possible evolutionary origins of their activities.

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Year:  2003        PMID: 14675551     DOI: 10.1016/j.sbi.2003.10.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  22 in total

1.  Mapping the reaction coordinates of enzymatic defluorination.

Authors:  Peter W Y Chan; Alexander F Yakunin; Elizabeth A Edwards; Emil F Pai
Journal:  J Am Chem Soc       Date:  2011-04-21       Impact factor: 15.419

2.  A single mutation in a tunnel to the active site changes the mechanism and kinetics of product release in haloalkane dehalogenase LinB.

Authors:  Lada Biedermannová; Zbyněk Prokop; Artur Gora; Eva Chovancová; Mihály Kovács; Jiří Damborsky; Rebecca C Wade
Journal:  J Biol Chem       Date:  2012-06-28       Impact factor: 5.157

Review 3.  Enzymatic chemistry of cyclopropane, epoxide, and aziridine biosynthesis.

Authors:  Christopher J Thibodeaux; Wei-chen Chang; Hung-wen Liu
Journal:  Chem Rev       Date:  2011-10-21       Impact factor: 60.622

4.  Expanding the Halohydrin Dehalogenase Enzyme Family: Identification of Novel Enzymes by Database Mining.

Authors:  Marcus Schallmey; Julia Koopmeiners; Elizabeth Wells; Rainer Wardenga; Anett Schallmey
Journal:  Appl Environ Microbiol       Date:  2014-09-19       Impact factor: 4.792

5.  A novel hydrolytic dehalogenase for the chlorinated aromatic compound chlorothalonil.

Authors:  Guangli Wang; Rong Li; Shunpeng Li; Jiandong Jiang
Journal:  J Bacteriol       Date:  2010-04-02       Impact factor: 3.490

Review 6.  Enzymatic Halogenation and Dehalogenation Reactions: Pervasive and Mechanistically Diverse.

Authors:  Vinayak Agarwal; Zachary D Miles; Jaclyn M Winter; Alessandra S Eustáquio; Abrahim A El Gamal; Bradley S Moore
Journal:  Chem Rev       Date:  2017-01-20       Impact factor: 60.622

7.  A mammalian reductive deiodinase has broad power to dehalogenate chlorinated and brominated substrates.

Authors:  Patrick M McTamney; Steven E Rokita
Journal:  J Am Chem Soc       Date:  2009-10-14       Impact factor: 15.419

Review 8.  Fundamental challenges in mechanistic enzymology: progress toward understanding the rate enhancements of enzymes.

Authors:  Daniel Herschlag; Aditya Natarajan
Journal:  Biochemistry       Date:  2013-03-14       Impact factor: 3.162

9.  Why are chlorinated pollutants so difficult to degrade aerobically? Redox stress limits 1,3-dichloroprop-1-ene metabolism by Pseudomonas pavonaceae.

Authors:  Pablo I Nikel; Danilo Pérez-Pantoja; Víctor de Lorenzo
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

10.  A catalytically versatile benzoyl-CoA reductase, key enzyme in the degradation of methyl- and halobenzoates in denitrifying bacteria.

Authors:  Oliver Tiedt; Jonathan Fuchs; Wolfgang Eisenreich; Matthias Boll
Journal:  J Biol Chem       Date:  2018-05-16       Impact factor: 5.157

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