Literature DB >> 14666981

Candidatus "Scalindua brodae", sp. nov., Candidatus "Scalindua wagneri", sp. nov., two new species of anaerobic ammonium oxidizing bacteria.

Markus Schmid1, Kerry Walsh, Rick Webb, W Irene C Rijpstra, Katinka van de Pas-Schoonen, Mark Jan Verbruggen, Thomas Hill, Bruce Moffett, John Fuerst, Stefan Schouten, Jaap S Sinninghe Damsté, James Harris, Phil Shaw, Mike Jetten, Marc Strous.   

Abstract

Anaerobic ammonium oxidation (anammox) is both a promising process in wastewater treatment and a long overlooked microbial physiology that can contribute significantly to biological nitrogen cycling in the world's oceans. Anammox is mediated by a monophyletic group of bacteria that branches deeply in the Planctomycetales. Here we describe a new genus and species of anaerobic ammonium oxidizing planctomycetes, discovered in a wastewater treatment plant (wwtp) treating landfill leachate in Pitsea, UK. The biomass from this wwtp showed high anammox activity (5.0 +/- 0.5 nmol/mg protein/min) and produced hydrazine from hydroxylamine, one of the unique features of anammox bacteria. Eight new planctomycete 16S rRNA gene sequences were present in the 16S rRNA gene clone library generated from the biomass. Four of these were affiliated to known anammox 16S rRNA gene sequences, but branched much closer to the root of the planctomycete line of descent. Fluorescence in situ hybridization (FISH) with oligonucleotide probes specific for these new sequences showed that two species (belonging to the same genus) together made up > 99% of the planctomycete population which constituted 20% of the total microbial community. The identification of these organisms as typical anammox bacteria was confirmed with electron microscopy and lipid analysis. The new species, provisionally named Candidatus "Scalindua brodae" and "Scalindua wagneri" considerably extend the biodiversity of the anammox lineage on the 16S rRNA gene level, but otherwise resemble known anammox bacteria. Simultaneously, another new species of the same genus, Candidatus "Scalindua sorokinii", was detected in the water column of the Black Sea, making this genus the most widespread of all anammox bacteria described so far.

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Year:  2003        PMID: 14666981     DOI: 10.1078/072320203770865837

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  78 in total

1.  Stable carbon isotopic fractionations associated with inorganic carbon fixation by anaerobic ammonium-oxidizing bacteria.

Authors:  Stefan Schouten; Marc Strous; Marcel M M Kuypers; W Irene C Rijpstra; Marianne Baas; Carsten J Schubert; Mike S M Jetten; Jaap S Sinninghe Damsté
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

2.  Anammox bacterial diversity in various aquatic ecosystems based on the detection of hydrazine oxidase genes (hzoA/hzoB).

Authors:  Matthew D Hirsch; Zachery T Long; Bongkeun Song
Journal:  Microb Ecol       Date:  2010-09-14       Impact factor: 4.552

3.  Environmental factors shape sediment anammox bacterial communities in hypernutrified Jiaozhou Bay, China.

Authors:  Hongyue Dang; Ruipeng Chen; Lin Wang; Lizhong Guo; Pingping Chen; Zuwang Tang; Fang Tian; Shaozheng Li; Martin G Klotz
Journal:  Appl Environ Microbiol       Date:  2010-09-10       Impact factor: 4.792

Review 4.  Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria.

Authors:  Markus C Schmid; Bart Maas; Ana Dapena; Katinka van de Pas-Schoonen; Jack van de Vossenberg; Boran Kartal; Laura van Niftrik; Ingo Schmidt; Irina Cirpus; J Gijs Kuenen; Michael Wagner; Jaap S Sinninghe Damsté; Marcel Kuypers; Niels Peter Revsbech; Ramon Mendez; Mike S M Jetten; Marc Strous
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

5.  Anaerobic ammonia-oxidizing bacteria and related activity in Baltimore inner harbor sediment.

Authors:  Yossi Tal; Joy E M Watts; Harold J Schreier
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

6.  Diversity and distribution of Planctomycetes and related bacteria in the suboxic zone of the Black Sea.

Authors:  John Kirkpatrick; Brian Oakley; Clara Fuchsman; Sujatha Srinivasan; James T Staley; James W Murray
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

7.  Molecular evidence for the broad distribution of anaerobic ammonium-oxidizing bacteria in freshwater and marine sediments.

Authors:  C Ryan Penton; Allan H Devol; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2006-10       Impact factor: 4.792

8.  Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system.

Authors:  Dagmar Woebken; Bernhard M Fuchs; Marcel M M Kuypers; Rudolf Amann
Journal:  Appl Environ Microbiol       Date:  2007-05-25       Impact factor: 4.792

9.  Linking ultrastructure and function in four genera of anaerobic ammonium-oxidizing bacteria: cell plan, glycogen storage, and localization of cytochrome C proteins.

Authors:  Laura van Niftrik; Willie J C Geerts; Elly G van Donselaar; Bruno M Humbel; Richard I Webb; John A Fuerst; Arie J Verkleij; Mike S M Jetten; Marc Strous
Journal:  J Bacteriol       Date:  2007-11-09       Impact factor: 3.490

10.  Subsurface microbial diversity in deep-granitic-fracture water in Colorado.

Authors:  Jason W Sahl; Raleigh Schmidt; Elizabeth D Swanner; Kevin W Mandernack; Alexis S Templeton; Thomas L Kieft; Richard L Smith; William E Sanford; Robert L Callaghan; Jeffry B Mitton; John R Spear
Journal:  Appl Environ Microbiol       Date:  2007-11-02       Impact factor: 4.792

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