Literature DB >> 14633998

Decatenation of DNA circles by FtsK-dependent Xer site-specific recombination.

Stephen C Y Ip1, Migena Bregu, François-Xavier Barre, David J Sherratt.   

Abstract

DNA replication results in interlinked (catenated) sister duplex molecules as a consequence of the intertwined helices that comprise duplex DNA. DNA topoisomerases play key roles in decatenation. We demonstrate a novel, efficient and directional decatenation process in vitro, which uses the combination of the Escherichia coli XerCD site-specific recombination system and a protein, FtsK, which facilitates simple synapsis of dif recombination sites during its translocation along DNA. We propose that the FtsK-XerCD recombination machinery, which converts chromosomal dimers to monomers, may also function in vivo in removing the final catenation links remaining upon completion of DNA replication.

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Year:  2003        PMID: 14633998      PMCID: PMC291834          DOI: 10.1093/emboj/cdg589

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  53 in total

1.  Topology of Xer recombination on catenanes produced by lambda integrase.

Authors:  J Bath; D J Sherratt; S D Colloms
Journal:  J Mol Biol       Date:  1999-06-18       Impact factor: 5.469

2.  The cytoplasmic domain of FtsK protein is required for resolution of chromosome dimers.

Authors:  W Steiner; G Liu; W D Donachie; P Kuempel
Journal:  Mol Microbiol       Date:  1999-01       Impact factor: 3.501

3.  Formation of knots in partially replicated DNA molecules.

Authors:  J M Sogo; A Stasiak; M L Martínez-Robles; D B Krimer; P Hernández; J B Schvartzman
Journal:  J Mol Biol       Date:  1999-02-26       Impact factor: 5.469

4.  Dynamic organization of chromosomal DNA in Escherichia coli.

Authors:  H Niki; Y Yamaichi; S Hiraga
Journal:  Genes Dev       Date:  2000-01-15       Impact factor: 11.361

5.  Genetical implications of the structure of deoxyribonucleic acid.

Authors:  J D WATSON; F H CRICK
Journal:  Nature       Date:  1953-05-30       Impact factor: 49.962

6.  Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid.

Authors:  J D WATSON; F H CRICK
Journal:  Nature       Date:  1953-04-25       Impact factor: 49.962

7.  The topological mechanism of phage lambda integrase.

Authors:  N J Crisona; R L Weinberg; B J Peter; D W Sumners; N R Cozzarelli
Journal:  J Mol Biol       Date:  1999-06-18       Impact factor: 5.469

8.  FtsK-dependent and -independent pathways of Xer site-specific recombination.

Authors:  G D Recchia; M Aroyo; D Wolf; G Blakely; D J Sherratt
Journal:  EMBO J       Date:  1999-10-15       Impact factor: 11.598

9.  Norfloxacin-induced DNA cleavage occurs at the dif resolvase locus in Escherichia coli and is the result of interaction with topoisomerase IV.

Authors:  A Hojgaard; H Szerlong; C Tabor; P Kuempel
Journal:  Mol Microbiol       Date:  1999-09       Impact factor: 3.501

10.  Asymmetric DNA bending in the Cre-loxP site-specific recombination synapse.

Authors:  F Guo; D N Gopaul; G D Van Duyne
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-22       Impact factor: 11.205

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  37 in total

Review 1.  A topological view of the replicon.

Authors:  Jorge B Schvartzman; Andrzej Stasiak
Journal:  EMBO Rep       Date:  2004-03       Impact factor: 8.807

2.  A septal chromosome segregator protein evolved into a conjugative DNA-translocator protein.

Authors:  Edgardo Sepulveda; Jutta Vogelmann; Günther Muth
Journal:  Mob Genet Elements       Date:  2011-09-01

3.  The two Escherichia coli chromosome arms locate to separate cell halves.

Authors:  Xindan Wang; Xun Liu; Christophe Possoz; David J Sherratt
Journal:  Genes Dev       Date:  2006-07-01       Impact factor: 11.361

4.  Selection for chromosome architecture in bacteria.

Authors:  Heather Hendrickson; Jeffrey G Lawrence
Journal:  J Mol Evol       Date:  2006-04-11       Impact factor: 2.395

5.  Addiction toxin Fst has unique effects on chromosome segregation and cell division in Enterococcus faecalis and Bacillus subtilis.

Authors:  S Patel; K E Weaver
Journal:  J Bacteriol       Date:  2006-08       Impact factor: 3.490

6.  Segregation of the replication terminus of the two Vibrio cholerae chromosomes.

Authors:  Preeti Srivastava; Richard A Fekete; Dhruba K Chattoraj
Journal:  J Bacteriol       Date:  2006-02       Impact factor: 3.490

Review 7.  Functional taxonomy of bacterial hyperstructures.

Authors:  Vic Norris; Tanneke den Blaauwen; Armelle Cabin-Flaman; Roy H Doi; Rasika Harshey; Laurent Janniere; Alfonso Jimenez-Sanchez; Ding Jun Jin; Petra Anne Levin; Eugenia Mileykovskaya; Abraham Minsky; Milton Saier; Kirsten Skarstad
Journal:  Microbiol Mol Biol Rev       Date:  2007-03       Impact factor: 11.056

8.  Mathematical validation of a biological model for unlinking replication catenanes by recombination.

Authors:  Makkuni Jayaram
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-11       Impact factor: 11.205

9.  Generation of supercoils in nicked and gapped DNA drives DNA unknotting and postreplicative decatenation.

Authors:  Dusan Racko; Fabrizio Benedetti; Julien Dorier; Yannis Burnier; Andrzej Stasiak
Journal:  Nucleic Acids Res       Date:  2015-07-06       Impact factor: 16.971

10.  FtsK-dependent XerCD-dif recombination unlinks replication catenanes in a stepwise manner.

Authors:  Koya Shimokawa; Kai Ishihara; Ian Grainge; David J Sherratt; Mariel Vazquez
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

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