Literature DB >> 14613204

A massively parallel PicoTiterPlate based platform for discrete picoliter-scale polymerase chain reactions.

John H Leamon1, William L Lee, Karrie R Tartaro, Janna R Lanza, Gary J Sarkis, Alex D deWinter, Jan Berka, Michael Weiner, Jonathan M Rothberg, Kenton L Lohman.   

Abstract

We demonstrate successful, simultaneous polymerase chain reaction (PCR) amplification of up to 300 000 discrete reactions in a novel platform, the PicoTiterPlate. In addition to elevated throughput, the PicoTiterPlate based amplifications (PTPCR) can be performed in extremely small volumes: individual reactions volumes are as low as 39.5 pL, with a total 15.3 microL reaction volume for the entire PicoTiterPlate. The bulk PTPCR product can be recovered and assayed with real-time PCR, or discrete PTPCR products can be driven to solid supports, enabling downstream applications such as translation/transcription or sequencing.

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Year:  2003        PMID: 14613204     DOI: 10.1002/elps.200305646

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  27 in total

1.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

2.  The colorectal microRNAome.

Authors:  Jordan M Cummins; Yiping He; Rebecca J Leary; Ray Pagliarini; Luis A Diaz; Tobias Sjoblom; Omer Barad; Zvi Bentwich; Anna E Szafranska; Emmanuel Labourier; Christopher K Raymond; Brian S Roberts; Hartmut Juhl; Kenneth W Kinzler; Bert Vogelstein; Victor E Velculescu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

3.  Systematic evaluation of allele-specific real-time PCR for the detection of minor HIV-1 variants with pol and env resistance mutations.

Authors:  Roger Paredes; Vincent C Marconi; Thomas B Campbell; Daniel R Kuritzkes
Journal:  J Virol Methods       Date:  2007-07-26       Impact factor: 2.014

4.  Applying rapid genome sequencing technologies to characterize pathogen genomes.

Authors:  Karyn Meltz Steinberg; David T Okou; Michael E Zwick
Journal:  Anal Chem       Date:  2008-02-01       Impact factor: 6.986

5.  The role of DNA diffusion in solid phase polymerase chain reaction with gel-immobilized primers in planar and capillary microarray format.

Authors:  Alexei L Drobyshev; Tatiana V Nasedkina; Natalia V Zakharova
Journal:  Biomicrofluidics       Date:  2009-12-01       Impact factor: 2.800

Review 6.  Next generation sequencing based approaches to epigenomics.

Authors:  Martin Hirst; Marco A Marra
Journal:  Brief Funct Genomics       Date:  2010-12       Impact factor: 4.241

Review 7.  Sequencing technologies - the next generation.

Authors:  Michael L Metzker
Journal:  Nat Rev Genet       Date:  2009-12-08       Impact factor: 53.242

Review 8.  Coming of age: ten years of next-generation sequencing technologies.

Authors:  Sara Goodwin; John D McPherson; W Richard McCombie
Journal:  Nat Rev Genet       Date:  2016-05-17       Impact factor: 53.242

9.  Massively parallel detection of gene expression in single cells using subnanolitre wells.

Authors:  Yuan Gong; Adebola O Ogunniyi; J Christopher Love
Journal:  Lab Chip       Date:  2010-08-04       Impact factor: 6.799

Review 10.  Next-generation sequencing for mitochondrial disorders.

Authors:  C J Carroll; V Brilhante; A Suomalainen
Journal:  Br J Pharmacol       Date:  2014-04       Impact factor: 8.739

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