Literature DB >> 14612558

Creation of the first anomeric D/L-sugar kinase by means of directed evolution.

Dirk Hoffmeister1, Jie Yang, Lesley Liu, Jon S Thorson.   

Abstract

Chemoenzymatic routes toward complex glycoconjugates often depend on the availability of sugar-1-phosphates. Yet the chemical synthesis of these vital components is often tedious, whereas natural enzymes capable of anomeric phosphorylation are known to be specific for one or only a few monosaccharides. Herein we describe the application of directed evolution and a high-throughput multisugar colorimetric screen to enhance the catalytic capabilities of the Escherichia coli galactokinase GalK. From this approach, one particular GalK mutant carrying a single amino acid exchange (Y371H) displayed a surprisingly substantial degree of kinase activity toward sugars as diverse as d-galacturonic acid, d-talose, l-altrose, and l-glucose, all of which failed as wild-type GalK substrates. Furthermore, this mutant provides enhanced turnover of the small pool of sugars converted by the wild-type enzyme. Comparison of this mutation to the recently solved structure of Lactococcus lactis GalK begins to provide a blueprint for further engineering of this vital class of enzyme. In addition, the rapid access to such promiscuous sugar C-1 kinases will significantly enhance accessibility to natural and unnatural sugar-1-phosphates and thereby impact both in vitro and in vivo glycosylation methodologies, such as natural product glycorandomization.

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Year:  2003        PMID: 14612558      PMCID: PMC263743          DOI: 10.1073/pnas.100.23.13184

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

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Review 2.  Improved biocatalysts by directed evolution and rational protein design.

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4.  Structure, mechanism and engineering of a nucleotidylyltransferase as a first step toward glycorandomization.

Authors:  W A Barton; J Lesniak; J B Biggins; P D Jeffrey; J Jiang; K R Rajashankar; J S Thorson; D B Nikolov
Journal:  Nat Struct Biol       Date:  2001-06

Review 5.  Designed evolution of enzymatic properties.

Authors:  I P Petrounia; F H Arnold
Journal:  Curr Opin Biotechnol       Date:  2000-08       Impact factor: 9.740

6.  Directed evolution of an enantioselective lipase.

Authors:  K Liebeton; A Zonta; K Schimossek; M Nardini; D Lang; B W Dijkstra; M T Reetz; K E Jaeger
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7.  Novel family shuffling methods for the in vitro evolution of enzymes.

Authors:  M Kikuchi; K Ohnishi; S Harayama
Journal:  Gene       Date:  1999-08-05       Impact factor: 3.688

Review 8.  Glycosides in medicine: "The role of glycosidic residue in biological activity".

Authors:  V Kren; L Martínková
Journal:  Curr Med Chem       Date:  2001-09       Impact factor: 4.530

Review 9.  Altering the glycosylation pattern of bioactive compounds.

Authors:  C Méndez; J A Salas
Journal:  Trends Biotechnol       Date:  2001-11       Impact factor: 19.536

10.  Altering the substrate specificity of cephalosporin acylase by directed evolution of the Beta -subunit.

Authors:  Linda G Otten; Charles F Sio; Johanna Vrielink; Robbert H Cool; Wim J Quax
Journal:  J Biol Chem       Date:  2002-08-26       Impact factor: 5.157

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  13 in total

Review 1.  Laboratory-directed protein evolution.

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Journal:  Microbiol Mol Biol Rev       Date:  2005-09       Impact factor: 11.056

2.  Expression, purification, crystallization and preliminary X-ray diffraction analysis of galactokinase from Pyrococcus horikoshii.

Authors:  Eiji Inagaki; Keiko Sakamoto; Naomi Obayashi; Takaho Terada; Mikako Shirouzu; Yoshitaka Bessho; Chizu Kuroishi; Seiki Kuramitsu; Akeo Shinkai; Shigeyuki Yokoyama
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-01-27

3.  The in vitro characterization of polyene glycosyltransferases AmphDI and NysDI.

Authors:  Changsheng Zhang; Rocco Moretti; Jiqing Jiang; Jon S Thorson
Journal:  Chembiochem       Date:  2008-10-13       Impact factor: 3.164

4.  Facile chemoenzymatic strategies for the synthesis and utilization of S-adenosyl-(L)-methionine analogues.

Authors:  Shanteri Singh; Jianjun Zhang; Tyler D Huber; Manjula Sunkara; Katherine Hurley; Randal D Goff; Guojun Wang; Wen Zhang; Chunming Liu; Jürgen Rohr; Steven G Van Lanen; Andrew J Morris; Jon S Thorson
Journal:  Angew Chem Int Ed Engl       Date:  2014-03-11       Impact factor: 15.336

5.  Integrated structural and evolutionary analysis reveals common mechanisms underlying adaptive evolution in mammals.

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Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-02       Impact factor: 11.205

6.  Expanding the nucleotide and sugar 1-phosphate promiscuity of nucleotidyltransferase RmlA via directed evolution.

Authors:  Rocco Moretti; Aram Chang; Pauline Peltier-Pain; Craig A Bingman; George N Phillips; Jon S Thorson
Journal:  J Biol Chem       Date:  2011-02-11       Impact factor: 5.157

7.  Enantioselective Total Synthesis of Nigelladine A via Late-Stage C-H Oxidation Enabled by an Engineered P450 Enzyme.

Authors:  Steven A Loskot; David K Romney; Frances H Arnold; Brian M Stoltz
Journal:  J Am Chem Soc       Date:  2017-07-24       Impact factor: 15.419

8.  A comparison of sugar indicators enables a universal high-throughput sugar-1-phosphate nucleotidyltransferase assay.

Authors:  Rocco Moretti; Jon S Thorson
Journal:  Anal Biochem       Date:  2008-03-15       Impact factor: 3.365

Review 9.  Natural-product sugar biosynthesis and enzymatic glycodiversification.

Authors:  Christopher J Thibodeaux; Charles E Melançon; Hung-wen Liu
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

Review 10.  The impact of enzyme engineering upon natural product glycodiversification.

Authors:  Gavin J Williams; Richard W Gantt; Jon S Thorson
Journal:  Curr Opin Chem Biol       Date:  2008-10       Impact factor: 8.822

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