Literature DB >> 16511293

Expression, purification, crystallization and preliminary X-ray diffraction analysis of galactokinase from Pyrococcus horikoshii.

Eiji Inagaki1, Keiko Sakamoto, Naomi Obayashi, Takaho Terada, Mikako Shirouzu, Yoshitaka Bessho, Chizu Kuroishi, Seiki Kuramitsu, Akeo Shinkai, Shigeyuki Yokoyama.   

Abstract

Galactokinase (EC 2.7.1.6) catalyzes the ATP-dependent phosphorylation of alpha-D-galactose to alpha-D-galactose-1-phosphate, in an additional metabolic branch of glycolysis. The apo-form crystal structure of the enzyme has not yet been elucidated. Crystals of galactokinase from Pyrococcus horikoshii were prepared in both the apo form and as a ternary complex with alpha-D-galactose and an ATP analogue. Diffraction data sets were collected to 1.24 A resolution for the apo form and to 1.7 A for the ternary complex form using synchrotron radiation. The apo-form crystals belong to space group C2, with unit-cell parameters a = 108.08, b = 38.91, c = 81.57 A, beta = 109.8 degrees. The ternary complex form was isomorphous with the apo form, except for the length of the a axis. The galactokinase activity of the enzyme was confirmed and the kinetic parameters at 323 K were determined.

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Year:  2006        PMID: 16511293      PMCID: PMC2150956          DOI: 10.1107/S1744309106001813

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

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Journal:  Tanpakushitsu Kakusan Koso       Date:  2002-06

2.  Molecular structure of Saccharomyces cerevisiae Gal1p, a bifunctional galactokinase and transcriptional inducer.

Authors:  James B Thoden; Christopher A Sellick; David J Timson; Richard J Reece; Hazel M Holden
Journal:  J Biol Chem       Date:  2005-08-22       Impact factor: 5.157

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Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

5.  Molecular structure of human galactokinase: implications for type II galactosemia.

Authors:  James B Thoden; David J Timson; Richard J Reece; Hazel M Holden
Journal:  J Biol Chem       Date:  2004-12-07       Impact factor: 5.157

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Structure-based engineering of E. coli galactokinase as a first step toward in vivo glycorandomization.

Authors:  Jie Yang; Xun Fu; Jianchun Liao; Lesley Liu; Jon S Thorson
Journal:  Chem Biol       Date:  2005-06

8.  Substrate specificity and mechanism from the structure of Pyrococcus furiosus galactokinase.

Authors:  Andrew Hartley; Steven E Glynn; Vladimir Barynin; Patrick J Baker; Svetlana E Sedelnikova; Corné Verhees; Daniel de Geus; John van der Oost; David J Timson; Richard J Reece; David W Rice
Journal:  J Mol Biol       Date:  2004-03-19       Impact factor: 5.469

9.  Molecular structure of galactokinase.

Authors:  James B Thoden; Hazel M Holden
Journal:  J Biol Chem       Date:  2003-06-09       Impact factor: 5.157

10.  Creation of the first anomeric D/L-sugar kinase by means of directed evolution.

Authors:  Dirk Hoffmeister; Jie Yang; Lesley Liu; Jon S Thorson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-11       Impact factor: 11.205

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  1 in total

1.  Expression, purification, crystallization and preliminary X-ray diffraction analysis of a galactose 1-phosphate uridylyltransferase from the hyperthermophilic archaeon Pyrobaculum aerophilum.

Authors:  Takenori Satomura; Akihiro Hiraki; Tomoyuki Kawai; Ryushi Kawakami; Toshihisa Ohshima; Haruhiko Sakuraba
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-02-23
  1 in total

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