Literature DB >> 14569461

Chromosomal phylogeny and evolution of gibbons (Hylobatidae).

Stefan Müller1, Melanie Hollatz, Johannes Wienberg.   

Abstract

Although human and gibbons are classified in the same primate superfamily (Hominoidae), their karyotypes differ by extensive chromosome reshuffling. To date, there is still limited understanding of the events that shaped extant gibbon karyotypes. Further, the phylogeny and evolution of the twelve or more extant gibbon species (lesser apes, Hylobatidae) is poorly understood, and conflicting phylogenies have been published. We present a comprehensive analysis of gibbon chromosome rearrangements and a phylogenetic reconstruction of the four recognized subgenera based on molecular cytogenetics data. We have used two different approaches to interpret our data: (1) a cladistic reconstruction based on the identification of ancestral versus derived chromosome forms observed in extant gibbon species; (2) an approach in which adjacent homologous segments that have been changed by translocations and intra-chromosomal rearrangements are treated as discrete characters in a parsimony analysis (PAUP). The orangutan serves as an "outgroup", since it has a karyotype that is supposed to be most similar to the ancestral form of all humans and apes. Both approaches place the subgenus Bunopithecus as the most basal group of the Hylobatidae, followed by Hylobates, with Symphalangus and Nomascus as the last to diverge. Since most chromosome rearrangements observed in gibbons are either ancestral to all four subgenera or specific for individual species and only a few common derived rearrangements at subsequent branching points have been recorded, all extant gibbons may have diverged within relatively short evolutionary time. In general, chromosomal rearrangements produce changes that should be considered as unique landmarks at the divergence nodes. Thus, molecular cytogenetics could be an important tool to elucidate phylogenies in other species in which speciation may have occurred over very short evolutionary time with not enough genetic (DNA sequence) and other biological divergence to be picked up.

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Year:  2003        PMID: 14569461     DOI: 10.1007/s00439-003-0997-2

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  29 in total

1.  Molecular phylogeny of the major hylobatid divisions.

Authors:  C Roos; T Geissmann
Journal:  Mol Phylogenet Evol       Date:  2001-06       Impact factor: 4.286

2.  Towards unlimited colors for fluorescence in-situ hybridization (FISH).

Authors:  Stefan Müller; Michaela Neusser; Johannes Wienberg
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

3.  Evolution of the gibbon subgenera inferred from cytochrome b DNA sequence data.

Authors:  L M Hall; D S Jones; B A Wood
Journal:  Mol Phylogenet Evol       Date:  1998-12       Impact factor: 4.286

4.  Evolutionary relationships between gibbon subgenera inferred from DNA sequence data.

Authors:  L M Hall; D Jones; B Wood
Journal:  Biochem Soc Trans       Date:  1996-08       Impact factor: 5.407

5.  PHYLOGENETIC RELATIONSHIPS BETWEEN MAN AND THE APES: ELECTROPHORETIC EVIDENCE.

Authors:  Elizabeth J Bruce; Francisco J Ayala
Journal:  Evolution       Date:  1979-12       Impact factor: 3.694

6.  Cytogenetic comparison and phylogeny of three species of Hylobatidae.

Authors:  P Van Tuinen; D H Ledbetter
Journal:  Am J Phys Anthropol       Date:  1983-08       Impact factor: 2.868

7.  A presumptive new hylobatid subgenus with 38 chromosomes.

Authors:  L A Prouty; P D Buchanan; W S Pollitzer; A R Mootnick
Journal:  Cytogenet Cell Genet       Date:  1983

8.  Cytogenetic analysis by chromosome painting using DOP-PCR amplified flow-sorted chromosomes.

Authors:  H Telenius; A H Pelmear; A Tunnacliffe; N P Carter; A Behmel; M A Ferguson-Smith; M Nordenskjöld; R Pfragner; B A Ponder
Journal:  Genes Chromosomes Cancer       Date:  1992-04       Impact factor: 5.006

9.  A phylogeny of gibbons (Hylobates spp.) based on morphological and behavioural characters.

Authors:  E H Haimoff; D J Chivers; S P Gittins; T Whitten
Journal:  Folia Primatol (Basel)       Date:  1982       Impact factor: 1.246

10.  Cross-species colour segmenting: a novel tool in human karyotype analysis.

Authors:  S Müller; P C O'Brien; M A Ferguson-Smith; J Wienberg
Journal:  Cytometry       Date:  1998-12-01
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  59 in total

1.  Repetitive sequences originating from the centromere constitute large-scale heterochromatin in the telomere region in the siamang, a small ape.

Authors:  A Koga; Y Hirai; T Hara; H Hirai
Journal:  Heredity (Edinb)       Date:  2012-06-06       Impact factor: 3.821

2.  Unresolved molecular phylogenies of gibbons and siamangs (Family: Hylobatidae) based on mitochondrial, Y-linked, and X-linked loci indicate a rapid Miocene radiation or sudden vicariance event.

Authors:  H Israfil; S M Zehr; A R Mootnick; M Ruvolo; M E Steiper
Journal:  Mol Phylogenet Evol       Date:  2010-11-11       Impact factor: 4.286

3.  Low rate of genomic repatterning in Xenarthra inferred from chromosome painting data.

Authors:  G Dobigny; F Yang; P C M O'Brien; V Volobouev; A Kovács; J C Pieczarka; M A Ferguson-Smith; T J Robinson
Journal:  Chromosome Res       Date:  2005-10-24       Impact factor: 5.239

4.  Are molecular cytogenetics and bioinformatics suggesting diverging models of ancestral mammalian genomes?

Authors:  Lutz Froenicke; Montserrat Garcia Caldés; Alexander Graphodatsky; Stefan Müller; Leslie A Lyons; Terence J Robinson; Marianne Volleth; Fengtang Yang; Johannes Wienberg
Journal:  Genome Res       Date:  2006-03       Impact factor: 9.043

5.  Comparative cytogenetics of bats (Chiroptera): the prevalence of Robertsonian translocations limits the power of chromosomal characters in resolving interfamily phylogenetic relationships.

Authors:  Xiuguang Mao; Wenhui Nie; Jinhuan Wang; Weiting Su; Qing Feng; Yingxiang Wang; Gauthier Dobigny; Fengtang Yang
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

Review 6.  Addressing chromosome evolution in the whole-genome sequence era.

Authors:  Thomas Faraut
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

Review 7.  Multilocus phylogeography and phylogenetics using sequence-based markers.

Authors:  Patrícia H Brito; Scott V Edwards
Journal:  Genetica       Date:  2008-07-24       Impact factor: 1.082

8.  A most distant intergeneric hybrid offspring (Larcon) of lesser apes, Nomascus leucogenys and Hylobates lar.

Authors:  Hirohisa Hirai; Yuriko Hirai; Hiroshi Domae; Yoko Kirihara
Journal:  Hum Genet       Date:  2007-08-24       Impact factor: 4.132

9.  Mitochondrial evidence for multiple radiations in the evolutionary history of small apes.

Authors:  Van Ngoc Thinh; Alan R Mootnick; Thomas Geissmann; Ming Li; Thomas Ziegler; Muhammad Agil; Pierre Moisson; Tilo Nadler; Lutz Walter; Christian Roos
Journal:  BMC Evol Biol       Date:  2010-03-12       Impact factor: 3.260

10.  Evolutionary breakpoints in the gibbon suggest association between cytosine methylation and karyotype evolution.

Authors:  Lucia Carbone; R Alan Harris; Gery M Vessere; Alan R Mootnick; Sean Humphray; Jane Rogers; Sung K Kim; Jeffrey D Wall; David Martin; Jerzy Jurka; Aleksandar Milosavljevic; Pieter J de Jong
Journal:  PLoS Genet       Date:  2009-06-26       Impact factor: 5.917

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