Literature DB >> 14567911

Targeting survival: integration site selection by retroviruses and LTR-retrotransposons.

Frederic D Bushman1.   

Abstract

Replication of retroviruses and retrotransposons depends on selecting a favorable chromosomal site for integration of their genomic DNA. Different retroelements meet this challenge by targeting distinctive chromosomal regions. Despite these differences, recent data hints at a common targeting mechanism-tethering of integration complexes to proteins bound at favorable sites.

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Substances:

Year:  2003        PMID: 14567911     DOI: 10.1016/s0092-8674(03)00760-8

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  94 in total

1.  An active murine transposon family pair: retrotransposition of "master" MusD copies and ETn trans-mobilization.

Authors:  David Ribet; Marie Dewannieux; Thierry Heidmann
Journal:  Genome Res       Date:  2004-10-12       Impact factor: 9.043

Review 2.  A realistic chance for gene therapy in the near future.

Authors:  Stefan Worgall
Journal:  Pediatr Nephrol       Date:  2004-11-10       Impact factor: 3.714

3.  Comprehensive analysis of microRNA genomic loci identifies pervasive repetitive-element origins.

Authors:  Glen M Borchert; Nathaniel W Holton; Jonathan D Williams; William L Hernan; Ian P Bishop; Joel A Dembosky; James E Elste; Nathaniel S Gregoire; Jee-Ah Kim; Wesley W Koehler; Joe C Lengerich; Arianna A Medema; Marilyn A Nguyen; Geoffrey D Ower; Michelle A Rarick; Brooke N Strong; Nicholas J Tardi; Nathan M Tasker; Darren J Wozniak; Craig Gatto; Erik D Larson
Journal:  Mob Genet Elements       Date:  2011-05

4.  Sleeping Beauty transposon mutagenesis in rat spermatogonial stem cells.

Authors:  Zoltán Ivics; Zsuzsanna Izsvák; Gerardo Medrano; Karen M Chapman; F Kent Hamra
Journal:  Nat Protoc       Date:  2011-09-08       Impact factor: 13.491

5.  A high-throughput method for cloning and sequencing human immunodeficiency virus type 1 integration sites.

Authors:  Sanggu Kim; Yein Kim; Teresa Liang; Janet S Sinsheimer; Samson A Chow
Journal:  J Virol       Date:  2006-09-13       Impact factor: 5.103

6.  Gammaretrovirus-mediated correction of SCID-X1 is associated with skewed vector integration site distribution in vivo.

Authors:  Kerstin Schwarzwaelder; Steven J Howe; Manfred Schmidt; Martijn H Brugman; Annette Deichmann; Hanno Glimm; Sonja Schmidt; Claudia Prinz; Manuela Wissler; Douglas J S King; Fang Zhang; Kathryn L Parsley; Kimberly C Gilmour; Joanna Sinclair; Jinhua Bayford; Rachel Peraj; Karin Pike-Overzet; Frank J T Staal; Dick de Ridder; Christine Kinnon; Ulrich Abel; Gerard Wagemaker; H Bobby Gaspar; Adrian J Thrasher; Christof von Kalle
Journal:  J Clin Invest       Date:  2007-08       Impact factor: 14.808

7.  Vector integration is nonrandom and clustered and influences the fate of lymphopoiesis in SCID-X1 gene therapy.

Authors:  Annette Deichmann; Salima Hacein-Bey-Abina; Manfred Schmidt; Alexandrine Garrigue; Martijn H Brugman; Jingqiong Hu; Hanno Glimm; Gabor Gyapay; Bernard Prum; Christopher C Fraser; Nicolas Fischer; Kerstin Schwarzwaelder; Maria-Luise Siegler; Dick de Ridder; Karin Pike-Overzet; Steven J Howe; Adrian J Thrasher; Gerard Wagemaker; Ulrich Abel; Frank J T Staal; Eric Delabesse; Jean-Luc Villeval; Bruce Aronow; Christophe Hue; Claudia Prinz; Manuela Wissler; Chuck Klanke; Jean Weissenbach; Ian Alexander; Alain Fischer; Christof von Kalle; Marina Cavazzana-Calvo
Journal:  J Clin Invest       Date:  2007-08       Impact factor: 14.808

8.  High-resolution genome-wide mapping of transposon integration in mammals.

Authors:  Stephen R Yant; Xiaolin Wu; Yong Huang; Brian Garrison; Shawn M Burgess; Mark A Kay
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

9.  Genomic localization of AtRE1 and AtRE2, copia-type retrotransposons, in natural variants of Arabidopsis thaliana.

Authors:  Mari Yamada; Yumi Yamagishi; Masashi Akaoka; Hidetaka Ito; Atsushi Kato
Journal:  Mol Genet Genomics       Date:  2014-04-27       Impact factor: 3.291

10.  Identification of an infectious progenitor for the multiple-copy HERV-K human endogenous retroelements.

Authors:  Marie Dewannieux; Francis Harper; Aurélien Richaud; Claire Letzelter; David Ribet; Gérard Pierron; Thierry Heidmann
Journal:  Genome Res       Date:  2006-10-31       Impact factor: 9.043

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