Literature DB >> 17077319

Identification of an infectious progenitor for the multiple-copy HERV-K human endogenous retroelements.

Marie Dewannieux1, Francis Harper, Aurélien Richaud, Claire Letzelter, David Ribet, Gérard Pierron, Thierry Heidmann.   

Abstract

Human Endogenous Retroviruses are expected to be the remnants of ancestral infections of primates by active retroviruses that have thereafter been transmitted in a Mendelian fashion. Here, we derived in silico the sequence of the putative ancestral "progenitor" element of one of the most recently amplified family - the HERV-K family - and constructed it. This element, Phoenix, produces viral particles that disclose all of the structural and functional properties of a bona-fide retrovirus, can infect mammalian, including human, cells, and integrate with the exact signature of the presently found endogenous HERV-K progeny. We also show that this element amplifies via an extracellular pathway involving reinfection, at variance with the non-LTR-retrotransposons (LINEs, SINEs) or LTR-retrotransposons, thus recapitulating ex vivo the molecular events responsible for its dissemination in the host genomes. We also show that in vitro recombinations among present-day human HERV-K (also known as ERVK) loci can similarly generate functional HERV-K elements, indicating that human cells still have the potential to produce infectious retroviruses.

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Year:  2006        PMID: 17077319      PMCID: PMC1665638          DOI: 10.1101/gr.5565706

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  36 in total

Review 1.  Targeting survival: integration site selection by retroviruses and LTR-retrotransposons.

Authors:  Frederic D Bushman
Journal:  Cell       Date:  2003-10-17       Impact factor: 41.582

2.  Survey of human genes of retroviral origin: identification and transcriptome of the genes with coding capacity for complete envelope proteins.

Authors:  Nathalie de Parseval; Vladimir Lazar; Jean-François Casella; Laurence Benit; Thierry Heidmann
Journal:  J Virol       Date:  2003-10       Impact factor: 5.103

3.  Identification of a functional envelope protein from the HERV-K family of human endogenous retroviruses.

Authors:  Marie Dewannieux; Sandra Blaise; Thierry Heidmann
Journal:  J Virol       Date:  2005-12       Impact factor: 5.103

4.  Genomic organization of the human endogenous retrovirus HERV-K(HML-2.HOM) (ERVK6) on chromosome 7.

Authors:  K Reus; J Mayer; M Sauter; D Scherer; N Müller-Lantzsch; E Meese
Journal:  Genomics       Date:  2001-03-15       Impact factor: 5.736

5.  Identification, phylogeny, and evolution of retroviral elements based on their envelope genes.

Authors:  L Bénit; P Dessen; T Heidmann
Journal:  J Virol       Date:  2001-12       Impact factor: 5.103

6.  Insertional polymorphisms of full-length endogenous retroviruses in humans.

Authors:  G Turner; M Barbulescu; M Su; M I Jensen-Seaman; K K Kidd; J Lenz
Journal:  Curr Biol       Date:  2001-10-02       Impact factor: 10.834

7.  A Tetrahymena thermophila ribozyme-based indicator gene to detect transposition of marked retroelements in mammalian cells.

Authors:  Cécile Esnault; Jean-François Casella; Thierry Heidmann
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

8.  Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database.

Authors:  M Tristem
Journal:  J Virol       Date:  2000-04       Impact factor: 5.103

9.  LINE-mediated retrotransposition of marked Alu sequences.

Authors:  Marie Dewannieux; Cécile Esnault; Thierry Heidmann
Journal:  Nat Genet       Date:  2003-08-03       Impact factor: 38.330

10.  An endogenous retrovirus derived from human melanoma cells.

Authors:  Thomas Muster; Andrea Waltenberger; Andreas Grassauer; Sonja Hirschl; Peri Caucig; Ingrid Romirer; Dagmar Födinger; Heide Seppele; Oliver Schanab; Christine Magin-Lachmann; Roswitha Löwer; Burkhard Jansen; Hubert Pehamberger; Klaus Wolff
Journal:  Cancer Res       Date:  2003-12-15       Impact factor: 12.701

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  148 in total

Review 1.  Endogenous viruses: insights into viral evolution and impact on host biology.

Authors:  Cédric Feschotte; Clément Gilbert
Journal:  Nat Rev Genet       Date:  2012-03-16       Impact factor: 53.242

2.  Retrofitting the genome: L1 extinction follows endogenous retroviral expansion in a group of muroid rodents.

Authors:  Issac K Erickson; Michael A Cantrell; LuAnn Scott; Holly A Wichman
Journal:  J Virol       Date:  2011-09-28       Impact factor: 5.103

3.  Broad-spectrum inhibition of retroviral and filoviral particle release by tetherin.

Authors:  Nolwenn Jouvenet; Stuart J D Neil; Maria Zhadina; Trinity Zang; Zerina Kratovac; Youngnam Lee; Matthew McNatt; Theodora Hatziioannou; Paul D Bieniasz
Journal:  J Virol       Date:  2008-11-26       Impact factor: 5.103

4.  Paleovirology: inferring viral evolution from host genome sequence data.

Authors:  Aris Katzourakis
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-08-12       Impact factor: 6.237

5.  Broad-scale phylogenomics provides insights into retrovirus-host evolution.

Authors:  Alexander Hayward; Manfred Grabherr; Patric Jern
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-25       Impact factor: 11.205

6.  Footprint of APOBEC3 on the genome of human retroelements.

Authors:  Firoz Anwar; Miles P Davenport; Diako Ebrahimi
Journal:  J Virol       Date:  2013-05-22       Impact factor: 5.103

Review 7.  Molecular evolution of the antiretroviral TRIM5 gene.

Authors:  Welkin E Johnson; Sara L Sawyer
Journal:  Immunogenetics       Date:  2009-02-24       Impact factor: 2.846

8.  Betaretroviral envelope subunits are noncovalently associated and restricted to the mammalian class.

Authors:  Jamie E Henzy; John M Coffin
Journal:  J Virol       Date:  2012-12-05       Impact factor: 5.103

9.  Hypermutation of an ancient human retrovirus by APOBEC3G.

Authors:  Young Nam Lee; Michael H Malim; Paul D Bieniasz
Journal:  J Virol       Date:  2008-06-18       Impact factor: 5.103

10.  Conserved footprints of APOBEC3G on Hypermutated human immunodeficiency virus type 1 and human endogenous retrovirus HERV-K(HML2) sequences.

Authors:  Andrew E Armitage; Aris Katzourakis; Tulio de Oliveira; John J Welch; Robert Belshaw; Kate N Bishop; Beatrice Kramer; Andrew J McMichael; Andrew Rambaut; Astrid K N Iversen
Journal:  J Virol       Date:  2008-06-18       Impact factor: 5.103

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