Literature DB >> 14563944

A tissue fixative that protects macromolecules (DNA, RNA, and protein) and histomorphology in clinical samples.

Vladimir Vincek1, Mehdi Nassiri, Mehrdad Nadji, Azorides R Morales.   

Abstract

Preservation of macromolecules (DNA, RNA, and proteins) in tissue is traditionally achieved by immediate freezing of the sample. Although isolation of PCR-able RNA has been reported from formalin-fixed, paraffin-embedded tissues, the process has not been shown to be reproducible because high molecular weight RNA is usually degraded. We investigated the potential value of a new universal molecular fixative (UMFIX, Sakura Finetek USA, Inc., Torrance, California) in preservation of macromolecules in paraffin-embedded tissue. Mouse and human tissues were fixed in UMFIX from 1 hour to 8 weeks. They were then processed by a rapid tissue processing (RTP) system, embedded in paraffin, and evaluated for routine histology as well as for the quality and quantity of DNA, RNA, and proteins. Formalin-fixed tissues were processed by RTP and evaluated in a similar manner. Fresh-frozen samples were used as controls. The morphology of UMFIX-exposed tissue was comparable to that fixed in formalin. High molecular weight RNA was preserved in tissue that was immediately fixed in UMFIX and stored from 1 hour to 8 weeks at room temperature. There were no significant differences between UMFIX-exposed and frozen tissues on PCR, RT-PCR, real-time PCR, and expression microarrays. Similarly, physical and antigenic preservation of proteins in UMFIX tissue was similar to fresh state. Both RNA and proteins were substantially degraded in formalin-fixed and similarly processed specimens. We concluded that it is now possible to preserve histomorphology and intact macromolecules in the same archival paraffin-embedded tissue through the use of a novel fixative and a rapid processing system.

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Year:  2003        PMID: 14563944     DOI: 10.1097/01.lab.0000090154.55436.d1

Source DB:  PubMed          Journal:  Lab Invest        ISSN: 0023-6837            Impact factor:   5.662


  45 in total

1.  Biospecimens and biorepositories for the community pathologist.

Authors:  Rajesh C Dash; James A Robb; David L Booker; Wen-Chi Foo; David L Witte; Lynn Bry
Journal:  Arch Pathol Lab Med       Date:  2012-06       Impact factor: 5.534

2.  Using DSP, a reversible cross-linker, to fix tissue sections for immunostaining, microdissection and expression profiling.

Authors:  Charlie C Xiang; Eva Mezey; Mei Chen; Sharon Key; Li Ma; Michael J Brownstein
Journal:  Nucleic Acids Res       Date:  2004-12-16       Impact factor: 16.971

3.  Antimicrobial activity of UMFix tissue fixative.

Authors:  T J Cleary; A R Morales; M Nadji; M Nassiri; V Vincek
Journal:  J Clin Pathol       Date:  2005-01       Impact factor: 3.411

4.  Tissue is alive: New technologies are needed to address the problems of protein biomarker pre-analytical variability.

Authors:  Virginia Espina; Claudius Mueller; Kirsten Edmiston; Manuela Sciro; Emanuel F Petricoin; Lance A Liotta
Journal:  Proteomics Clin Appl       Date:  2009-08-01       Impact factor: 3.494

5.  DNA and RNA isolated from tissues processed by microwave-accelerated apparatus MFX-800-3 are suitable for subsequent PCR and Q-RT-PCR amplification.

Authors:  Csaba Bödör; Otto Schmidt; Balázs Csernus; Hajnalka Rajnai; Béla Szende
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6.  The use of endobronchial ultrasound guided transbronchial needle aspiration specimens for next generation sequencing in non-small cell lung cancer: a clinical perspective.

Authors:  Sean Stoy; Septimiu Murgu
Journal:  J Thorac Dis       Date:  2017-04       Impact factor: 2.895

Review 7.  Beyond laser microdissection technology: follow the yellow brick road for cancer research.

Authors:  Luc G Legres; Anne Janin; Christophe Masselon; Philippe Bertheau
Journal:  Am J Cancer Res       Date:  2014-01-15       Impact factor: 6.166

8.  miRNA expressions in rectal cancer as predictors of response to neoadjuvant chemoradiation therapy.

Authors:  Elrasheid A H Kheirelseid; Nicola Miller; Kah Hoong Chang; Catherine Curran; Emer Hennessey; Margaret Sheehan; John Newell; Christophe Lemetre; Graham Balls; Michael J Kerin
Journal:  Int J Colorectal Dis       Date:  2012-08-18       Impact factor: 2.571

9.  Fibulin-5 expression is decreased in women with anterior vaginal wall prolapse.

Authors:  Peter Takacs; Mehdi Nassiri; Anita Viciana; Keith Candiotti; Alessia Fornoni; Carlos A Medina
Journal:  Int Urogynecol J Pelvic Floor Dysfunct       Date:  2008-11-07

Review 10.  A review of room temperature storage of biospecimen tissue and nucleic acids for anatomic pathology laboratories and biorepositories.

Authors:  Jerry J Lou; Leili Mirsadraei; Desiree E Sanchez; Ryan W Wilson; Maryam Shabihkhani; Gregory M Lucey; Bowen Wei; Elyse J Singer; Sergey Mareninov; William H Yong
Journal:  Clin Biochem       Date:  2013-12-18       Impact factor: 3.281

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