Literature DB >> 24482735

Beyond laser microdissection technology: follow the yellow brick road for cancer research.

Luc G Legres1, Anne Janin2, Christophe Masselon3, Philippe Bertheau2.   

Abstract

Normal biological tissues harbour different populations of cells with intricate spacial distribution patterns resulting in heterogeneity of their overall cellular composition. Laser microdissection involving direct viewing and expertise by a pathologist, enables access to defined cell populations or specific region on any type of tissue sample, thus selecting near-pure populations of targeted cells. It opens the way for molecular methods directed towards well-defined populations, and provides also a powerful tool in studies focused on a limited number of cells. Laser microdissection has wide applications in oncology (diagnosis and research), cellular and molecular biology, biochemistry and forensics for tissue selection, but other areas have been gradually opened up to these new methodological approaches, such as cell cultures and cytogenetics. In clinical oncology trials, molecular profiling of microdissected samples can yield global "omics" information which, together, with the morphological analysis of cells, can provide the basis for diagnosis, prognosis and patient-tailored treatments. This remarkable technology has brought new insights in the understanding of DNA, RNA, and the biological functions and regulation of proteins to identify molecular disease signatures. We review herein the different applications of laser microdissection in a variety of fields, and we particularly focus attention on the pre-analytical steps that are crucial to successfully perform molecular-level investigations.

Entities:  

Keywords:  DNA; Laser microdissection; RNA; histopathology; in situ cellular and molecular analyses; proteomics; quality control; snap-freezing

Year:  2014        PMID: 24482735      PMCID: PMC3902229     

Source DB:  PubMed          Journal:  Am J Cancer Res        ISSN: 2156-6976            Impact factor:   6.166


  189 in total

1.  Laser-assisted microdissection of membrane-mounted paraffin sections for polymerase chain reaction analysis: identification of cell populations using immunohistochemistry and in situ hybridization.

Authors:  L M Gjerdrum; I Lielpetere; L M Rasmussen; K Bendix; S Hamilton-Dutoit
Journal:  J Mol Diagn       Date:  2001-08       Impact factor: 5.568

2.  Frequent loss of heterozygosity in early non-small cell lung cancers at chromosome 9p21 proximal to the CDKN2a gene.

Authors:  L J Mead; M T Gillespie; J Y Hung; U S Rane; K C Rayeroux; L B Irving; L J Campbell
Journal:  Int J Cancer       Date:  1997-04-10       Impact factor: 7.396

3.  Renal biopsy frozen section: a fluorescent study of hematoxylin and eosin-stained sections.

Authors:  S M Bonsib; M J Reznicek
Journal:  Mod Pathol       Date:  1990-03       Impact factor: 7.842

4.  Nucleic acids extraction from laser microdissected FFPE tissue sections.

Authors:  Renate Burgemeister
Journal:  Methods Mol Biol       Date:  2011

5.  Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffin-embedded, and unfixed frozen tissue samples.

Authors:  Marshall S Scicchitano; Deidre A Dalmas; Melissa A Bertiaux; Shawn M Anderson; Leah R Turner; Roberta A Thomas; Rossana Mirable; Rogely W Boyce
Journal:  J Histochem Cytochem       Date:  2006-07-24       Impact factor: 2.479

6.  2D differential in-gel electrophoresis for the identification of esophageal scans cell cancer-specific protein markers.

Authors:  Ge Zhou; Hongmei Li; Dianne DeCamp; She Chen; Hongjun Shu; Yi Gong; Michael Flaig; John W Gillespie; Nan Hu; Philip R Taylor; Michael R Emmert-Buck; Lance A Liotta; Emanuel F Petricoin; Yingming Zhao
Journal:  Mol Cell Proteomics       Date:  2002-02       Impact factor: 5.911

Review 7.  Laser-capture microdissection: opening the microscopic frontier to molecular analysis.

Authors:  N L Simone; R F Bonner; J W Gillespie; M R Emmert-Buck; L A Liotta
Journal:  Trends Genet       Date:  1998-07       Impact factor: 11.639

8.  von Hippel-Lindau disease gene deletion detected in microdissected sporadic human colon carcinoma specimens.

Authors:  Z Zhuang; M R Emmert-Buck; M J Roth; J Gnarra; W M Linehan; L A Liotta; I A Lubensky
Journal:  Hum Pathol       Date:  1996-02       Impact factor: 3.466

9.  Combination of microdissection and microarray analysis to identify gene expression changes between differentially located tumour cells in breast cancer.

Authors:  Gang Zhu; Louise Reynolds; Tatjana Crnogorac-Jurcevic; Cheryl E Gillett; Edwin A Dublin; John F Marshall; Diana Barnes; Corrado D'Arrigo; Philippe O Van Trappen; Nicholas R Lemoine; Ian R Hart
Journal:  Oncogene       Date:  2003-06-12       Impact factor: 9.867

10.  Suspension fluorescence in situ hybridization (S-FISH) combined with automatic detection and laser microdissection for STR profiling of male cells in male/female mixtures.

Authors:  Mado Vandewoestyne; David Van Hoofstat; Filip Van Nieuwerburgh; Dieter Deforce
Journal:  Int J Legal Med       Date:  2009-03-25       Impact factor: 2.686

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  14 in total

1.  Formalin-fixed paraffin-embedded sample conditions for deep next generation sequencing.

Authors:  Masayuki Nagahashi; Yoshifumi Shimada; Hiroshi Ichikawa; Satoru Nakagawa; Nobuaki Sato; Koji Kaneko; Keiichi Homma; Takashi Kawasaki; Keisuke Kodama; Stephen Lyle; Kazuaki Takabe; Toshifumi Wakai
Journal:  J Surg Res       Date:  2017-07-27       Impact factor: 2.192

2.  Optimization of RNA extraction from laser captured microdissected glomeruli from formalin-fixed paraffin-embedded mouse kidney samples for Nanostring analysis.

Authors:  Abigail Hay; Jean-Martin Lapointe; Arthur Lewis; Carol Moreno Quinn; Elena Miranda
Journal:  Histol Histopathol       Date:  2019-06-11       Impact factor: 2.303

Review 3.  Toward precision medicine of breast cancer.

Authors:  Nicolas Carels; Lizânia Borges Spinassé; Tatiana Martins Tilli; Jack Adam Tuszynski
Journal:  Theor Biol Med Model       Date:  2016-02-29       Impact factor: 2.432

4.  Usefulness of miRNA profiles for predicting pathological responses to neoadjuvant chemotherapy in patients with human epidermal growth factor receptor 2-positive breast cancer.

Authors:  Hideyuki Ohzawa; Atsushi Miki; Takumi Teratani; Satomi Shiba; Yasunaru Sakuma; Wataru Nishimura; Yasuko Noda; Noriyoshi Fukushima; Hirofumi Fujii; Yasuo Hozumi; Hirofumi Mukai; Yoshikazu Yasuda
Journal:  Oncol Lett       Date:  2017-01-19       Impact factor: 2.967

Review 5.  Progress and opportunities in molecular pathological epidemiology of colorectal premalignant lesions.

Authors:  Paul Lochhead; Andrew T Chan; Edward Giovannucci; Charles S Fuchs; Kana Wu; Reiko Nishihara; Michael O'Brien; Shuji Ogino
Journal:  Am J Gastroenterol       Date:  2014-06-17       Impact factor: 10.864

Review 6.  Getting Down to Specifics: Profiling Gene Expression and Protein-DNA Interactions in a Cell Type-Specific Manner.

Authors:  Colin D McClure; Tony D Southall
Journal:  Adv Genet       Date:  2015-07-23       Impact factor: 1.944

7.  Application of NeuroTrace staining in the fresh frozen brain samples to laser microdissection combined with quantitative RT-PCR analysis.

Authors:  Seico Benner; Masaki Kakeyama; Toshihiro Endo; Wataru Yoshioka; Chiharu Tohyama
Journal:  BMC Res Notes       Date:  2015-06-20

8.  Spatially resolved analysis of Pseudomonas aeruginosa biofilm proteomes measured by laser ablation sample transfer.

Authors:  Aruni Chathurya Pulukkody; Yeni P Yung; Fabrizio Donnarumma; Kermit K Murray; Ross P Carlson; Luke Hanley
Journal:  PLoS One       Date:  2021-07-22       Impact factor: 3.240

Review 9.  Mammary stem cells: expansion and animal productivity.

Authors:  Ratan K Choudhary
Journal:  J Anim Sci Biotechnol       Date:  2014-07-07

10.  Laser capture microdissection to study Bacillus cereus iron homeostasis gene expression during Galleria mellonella in vivo gut colonization.

Authors:  Laurent Consentino; Agnès Rejasse; Nicolas Crapart; Claudia Bevilacqua; Christina Nielsen-LeRoux
Journal:  Virulence       Date:  2021-12       Impact factor: 5.882

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