Literature DB >> 1454055

In vitro reconstitution of U1 and U2 snRNPs from isolated proteins and snRNA.

V Sumpter1, A Kahrs, U Fischer, U Kornstädt, R Lührmann.   

Abstract

In this paper we describe a method for preparing native, RNA-free, proteins from anti-m3G purified snRNPs (U1, U2, U4/U6 and U5) and the subsequent quantitative reconstitution of U1 and U2 snRNPs from purified proteins and snRNA. Reconstituted U1 and U2 snRNPs contained the full complement of core proteins, B, B', D1, D2, D3, E, F and G. Both the U1 and U2 reconstituted particles were stable in CsCl gradients and had the expected buoyant density of 1.4 g/cm3. Reconstituted RNP particle formation was not competited by a 50 fold molar excess of tRNA, as determined by gel retardation assays. However, U1 and U2 particle formation was reduced in the presence of an excess of cold U1 or U2 snRNA demonstrating a specific RNA-protein interaction. U1 and U2 snRNPs were also efficiently reconstituted in vitro, utilizing proteins prepared from mono Q purified U1 and U2 snRNPs. This suggests that for the assembly of snRNPs in vitro no auxiliary proteins other than bona fide snRNP proteins appear to be required. The potential of this reconstitution technique for investigating snRNP assembly and snRNA-protein interactions is discussed.

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Year:  1992        PMID: 1454055     DOI: 10.1007/bf00419662

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  31 in total

1.  In vitro reconstitution of snRNPs: a reconstituted U4/U6 snRNP participates in splicing complex formation.

Authors:  C W Pikielny; A Bindereif; M R Green
Journal:  Genes Dev       Date:  1989-04       Impact factor: 11.361

2.  20S small nuclear ribonucleoprotein U5 shows a surprisingly complex protein composition.

Authors:  M Bach; G Winkelmann; R Lührmann
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

3.  Evidence for three distinct D proteins, which react differentially with anti-Sm autoantibodies, in the cores of the major snRNPs U1, U2, U4/U6 and U5.

Authors:  T Lehmeier; K Foulaki; R Lührmann
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

Review 4.  Structure of spliceosomal snRNPs and their role in pre-mRNA splicing.

Authors:  R Lührmann; B Kastner; M Bach
Journal:  Biochim Biophys Acta       Date:  1990-11-30

5.  Major determinants of the specificity of interaction between small nuclear ribonucleoproteins U1A and U2B'' and their cognate RNAs.

Authors:  D Scherly; W Boelens; N A Dathan; W J van Venrooij; I W Mattaj
Journal:  Nature       Date:  1990-06-07       Impact factor: 49.962

6.  U5 small nuclear ribonucleoprotein: RNA structure analysis and ATP-dependent interaction with U4/U6.

Authors:  D L Black; A L Pinto
Journal:  Mol Cell Biol       Date:  1989-08       Impact factor: 4.272

7.  U2 small nuclear RNP assembly in vitro.

Authors:  A M Kleinschmidt; J R Patton; T Pederson
Journal:  Nucleic Acids Res       Date:  1989-06-26       Impact factor: 16.971

8.  Structure-probing of U1 snRNPs gradually depleted of the U1-specific proteins A, C and 70k. Evidence that A interacts differentially with developmentally regulated mouse U1 snRNA variants.

Authors:  M Bach; A Krol; R Lührmann
Journal:  Nucleic Acids Res       Date:  1990-02-11       Impact factor: 16.971

9.  Characterisation of human and murine snRNP proteins by two-dimensional gel electrophoresis and phosphopeptide analysis of U1-specific 70K protein variants.

Authors:  A Woppmann; T Patschinsky; P Bringmann; F Godt; R Lührmann
Journal:  Nucleic Acids Res       Date:  1990-08-11       Impact factor: 16.971

10.  Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus.

Authors:  M R Lerner; J A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  1979-11       Impact factor: 11.205

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  26 in total

1.  Spliceosomal U snRNP core assembly: Sm proteins assemble onto an Sm site RNA nonanucleotide in a specific and thermodynamically stable manner.

Authors:  V A Raker; K Hartmuth; B Kastner; R Lührmann
Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

2.  Conserved loop I of U5 small nuclear RNA is dispensable for both catalytic steps of pre-mRNA splicing in HeLa nuclear extracts.

Authors:  V Ségault; C L Will; M Polycarpou-Schwarz; I W Mattaj; C Branlant; R Lührmann
Journal:  Mol Cell Biol       Date:  1999-04       Impact factor: 4.272

3.  Symmetrical dimethylation of arginine residues in spliceosomal Sm protein B/B' and the Sm-like protein LSm4, and their interaction with the SMN protein.

Authors:  H Brahms; L Meheus; V de Brabandere; U Fischer; R Lührmann
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

4.  The survival of motor neurons protein determines the capacity for snRNP assembly: biochemical deficiency in spinal muscular atrophy.

Authors:  Lili Wan; Daniel J Battle; Jeongsik Yong; Amelie K Gubitz; Stephen J Kolb; Jin Wang; Gideon Dreyfuss
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

5.  The snRNP core assembly pathway: identification of stable core protein heteromeric complexes and an snRNP subcore particle in vitro.

Authors:  V A Raker; G Plessel; R Lührmann
Journal:  EMBO J       Date:  1996-05-01       Impact factor: 11.598

6.  In vitro reconstitution of mammalian U1 snRNPs active in splicing: the U1-C protein enhances the formation of early (E) spliceosomal complexes.

Authors:  C L Will; S Rümpler; J Klein Gunnewiek; W J van Venrooij; R Lührmann
Journal:  Nucleic Acids Res       Date:  1996-12-01       Impact factor: 16.971

7.  Reconstitution of the human U snRNP assembly machinery reveals stepwise Sm protein organization.

Authors:  Nils Neuenkirchen; Clemens Englbrecht; Jürgen Ohmer; Thomas Ziegenhals; Ashwin Chari; Utz Fischer
Journal:  EMBO J       Date:  2015-06-11       Impact factor: 11.598

Review 8.  Spliceosomal small nuclear ribonucleoprotein biogenesis defects and motor neuron selectivity in spinal muscular atrophy.

Authors:  Eileen Workman; Stephen J Kolb; Daniel J Battle
Journal:  Brain Res       Date:  2012-02-28       Impact factor: 3.252

9.  m3G cap hypermethylation of U1 small nuclear ribonucleoprotein (snRNP) in vitro: evidence that the U1 small nuclear RNA-(guanosine-N2)-methyltransferase is a non-snRNP cytoplasmic protein that requires a binding site on the Sm core domain.

Authors:  G Plessel; U Fischer; R Lührmann
Journal:  Mol Cell Biol       Date:  1994-06       Impact factor: 4.272

Review 10.  Spinal muscular atrophy: journeying from bench to bedside.

Authors:  Tomoyuki Awano; Jeong-Ki Kim; Umrao R Monani
Journal:  Neurotherapeutics       Date:  2014-10       Impact factor: 7.620

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