Literature DB >> 2748338

U2 small nuclear RNP assembly in vitro.

A M Kleinschmidt1, J R Patton, T Pederson.   

Abstract

Incubation of a SP6-transcribed human U2 RNA precursor molecule in a HeLa cell S100 fraction resulted in the formation of ribonucleoprotein complexes. In the presence of ATP, the particles that assembled had several properties of native U2 snRNP, including resistance to dissociation in Cs2SO4 gradients, their buoyant density, and pattern of digestion by micrococcal nuclease. These particles also reacted with Sm monoclonal antibody and a human autoantibody with specificity for the U2 snRNP-specific proteins A' and B", but not with antibodies for U1 snRNP-specific proteins. In contrast, the particles that formed in the absence of ATP did not have these properties. ATP analogs with non-hydrolyzable beta-gamma bonds did not substitute for ATP in U2 snRNP assembly. Additional experiments with a mutant U2 RNA confirmed that nucleotides 154-167 of U2 RNA are required for binding of the U2 snRNP-specific proteins but not of the "Sm" core proteins. Pseudouridine formation, a major post-transcriptional modification of U2 RNA, was enhanced under assembly permissive conditions.

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Year:  1989        PMID: 2748338      PMCID: PMC318034          DOI: 10.1093/nar/17.12.4817

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  Use of in vitro 32P labeling in the sequence analysis of nonradioactive tRNAs.

Authors:  M Silberklang; A M Gillum; U L RajBhandary
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

2.  In vitro reconstitution of snRNPs: a reconstituted U4/U6 snRNP participates in splicing complex formation.

Authors:  C W Pikielny; A Bindereif; M R Green
Journal:  Genes Dev       Date:  1989-04       Impact factor: 11.361

3.  Purification of methionine-, valine-, phenylalanine- and tyrosine-specific tRNA from Escherichia coli.

Authors:  S Nishimura; F Harada; U Narushima; T Seno
Journal:  Biochim Biophys Acta       Date:  1967-06-20

4.  Interaction of snRNAs with rapidly sedimenting nuclear sub-structures (hnRNPs) from HeLa cells.

Authors:  J Sri-Widada; J P Liautard; C Brunel; P Jeanteur
Journal:  Nucleic Acids Res       Date:  1983-10-11       Impact factor: 16.971

5.  Structural organization of ribonucleoproteins containing small nuclear RNAs from HeLa cells. Proteins interact closely with a similar structural domain of U1, U2, U4 and U5 small nuclear RNAs.

Authors:  J P Liautard; J Sri-Widada; C Brunel; P Jeanteur
Journal:  J Mol Biol       Date:  1982-12-15       Impact factor: 5.469

6.  Protein binding sites are conserved in U1 small nuclear RNA from insects and mammals.

Authors:  E D Wieben; S J Madore; T Pederson
Journal:  Proc Natl Acad Sci U S A       Date:  1983-03       Impact factor: 11.205

7.  Small nuclear ribonucleoproteins of Drosophila: identification of U1 RNA-associated proteins and their behavior during heat shock.

Authors:  E D Wieben; T Pederson
Journal:  Mol Cell Biol       Date:  1982-08       Impact factor: 4.272

8.  Nucleocytoplasmic distribution of snRNPs and stockpiled snRNA-binding proteins during oogenesis and early development in Xenopus laevis.

Authors:  R Zeller; T Nyffenegger; E M De Robertis
Journal:  Cell       Date:  1983-02       Impact factor: 41.582

9.  Purification and properties of a mammalian tRNA pseudouridine synthase.

Authors:  C J Green; H O Kammen; E E Penhoet
Journal:  J Biol Chem       Date:  1982-03-25       Impact factor: 5.157

10.  U1 small nuclear ribonucleoprotein studied by in vitro assembly.

Authors:  E D Wieben; S J Madore; T Pederson
Journal:  J Cell Biol       Date:  1983-06       Impact factor: 10.539

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  17 in total

1.  In vitro reconstitution of U1 and U2 snRNPs from isolated proteins and snRNA.

Authors:  V Sumpter; A Kahrs; U Fischer; U Kornstädt; R Lührmann
Journal:  Mol Biol Rep       Date:  1992-09       Impact factor: 2.316

2.  The survival of motor neurons protein determines the capacity for snRNP assembly: biochemical deficiency in spinal muscular atrophy.

Authors:  Lili Wan; Daniel J Battle; Jeongsik Yong; Amelie K Gubitz; Stephen J Kolb; Jin Wang; Gideon Dreyfuss
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

3.  A weak interaction between the U2A' protein and U2 snRNA helps to stabilize their complex with the U2B" protein.

Authors:  W Boelens; D Scherly; R P Beijer; E J Jansen; N A Dathan; I W Mattaj; W J van Venrooij
Journal:  Nucleic Acids Res       Date:  1991-02-11       Impact factor: 16.971

4.  RNA processing and ribonucleoprotein assembly studied in vivo by RNA transfection.

Authors:  A M Kleinschmidt; T Pederson
Journal:  Proc Natl Acad Sci U S A       Date:  1990-02       Impact factor: 11.205

5.  3' processing of human pre-U2 small nuclear RNA: a base-pairing interaction between the 3' extension of the precursor and an internal region.

Authors:  Q Huang; M R Jacobson; T Pederson
Journal:  Mol Cell Biol       Date:  1997-12       Impact factor: 4.272

Review 6.  Spliceosomal small nuclear ribonucleoprotein biogenesis defects and motor neuron selectivity in spinal muscular atrophy.

Authors:  Eileen Workman; Stephen J Kolb; Daniel J Battle
Journal:  Brain Res       Date:  2012-02-28       Impact factor: 3.252

7.  Nucleocytoplasmic transport and processing of small nuclear RNA precursors.

Authors:  H E Neuman de Vegvar; J E Dahlberg
Journal:  Mol Cell Biol       Date:  1990-07       Impact factor: 4.272

8.  In vitro splicing of pre-messenger RNA with extracts from 5-fluorouridine-treated cells.

Authors:  J R Patton
Journal:  Biochem J       Date:  1994-01-15       Impact factor: 3.857

9.  m3G cap hypermethylation of U1 small nuclear ribonucleoprotein (snRNP) in vitro: evidence that the U1 small nuclear RNA-(guanosine-N2)-methyltransferase is a non-snRNP cytoplasmic protein that requires a binding site on the Sm core domain.

Authors:  G Plessel; U Fischer; R Lührmann
Journal:  Mol Cell Biol       Date:  1994-06       Impact factor: 4.272

Review 10.  SMN regulation in SMA and in response to stress: new paradigms and therapeutic possibilities.

Authors:  Catherine E Dominguez; David Cunningham; Dawn S Chandler
Journal:  Hum Genet       Date:  2017-08-29       Impact factor: 4.132

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