Literature DB >> 14536072

Ribosomal proteins S12 and S13 function as control elements for translocation of the mRNA:tRNA complex.

Anthony R Cukras1, Daniel R Southworth, Julie L Brunelle, Gloria M Culver, Rachel Green.   

Abstract

Translocation of the mRNA:tRNA complex through the ribosome is promoted by elongation factor G (EF-G) during the translation cycle. Previous studies established that modification of ribosomal proteins with thiol-specific reagents promotes this event in the absence of EF-G. Here we identify two small subunit interface proteins S12 and S13 that are essential for maintenance of a pretranslocation state. Omission of these proteins using in vitro reconstitution procedures yields ribosomal particles that translate in the absence of enzymatic factors. Conversely, replacement of cysteine residues in these two proteins yields ribosomal particles that are refractive to stimulation with thiol-modifying reagents. These data support a model where S12 and S13 function as control elements for the more ancient rRNA- and tRNA-driven movements of translocation.

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Year:  2003        PMID: 14536072     DOI: 10.1016/s1097-2765(03)00275-2

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  56 in total

1.  Conserved but nonessential interaction of SRP RNA with translation factor EF-G.

Authors:  Madi Bidya Sagar; Louise Lucast; Jennifer A Doudna
Journal:  RNA       Date:  2004-05       Impact factor: 4.942

2.  RNA chaperone activity of large ribosomal subunit proteins from Escherichia coli.

Authors:  Katharina Semrad; Rachel Green; Renée Schroeder
Journal:  RNA       Date:  2004-11-03       Impact factor: 4.942

3.  Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation.

Authors:  Anthony R Cukras; Rachel Green
Journal:  J Mol Biol       Date:  2005-04-12       Impact factor: 5.469

4.  Characterization of GE82832, a peptide inhibitor of translocation interacting with bacterial 30S ribosomal subunits.

Authors:  Letizia Brandi; Attilio Fabbretti; Michele Di Stefano; Ameriga Lazzarini; Monica Abbondi; Claudio O Gualerzi
Journal:  RNA       Date:  2006-05-12       Impact factor: 4.942

5.  An arc of unpaired "hinge bases" facilitates information exchange among functional centers of the ribosome.

Authors:  Rasa Rakauskaite; Jonathan D Dinman
Journal:  Mol Cell Biol       Date:  2006-09-25       Impact factor: 4.272

6.  Structural basis for mRNA and tRNA positioning on the ribosome.

Authors:  Veysel Berk; Wen Zhang; Raj D Pai; Jamie H D Cate; Jamie H Doudna Cate
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-12       Impact factor: 11.205

7.  tRNA Fluctuations Observed on Stalled Ribosomes Are Suppressed during Ongoing Protein Synthesis.

Authors:  Ryan M Jamiolkowski; Chunlai Chen; Barry S Cooperman; Yale E Goldman
Journal:  Biophys J       Date:  2017-12-05       Impact factor: 4.033

Review 8.  Ribosomal translocation: one step closer to the molecular mechanism.

Authors:  Shinichiro Shoji; Sarah E Walker; Kurt Fredrick
Journal:  ACS Chem Biol       Date:  2009-02-20       Impact factor: 5.100

9.  Coevolution of the translational machinery optimizes initiation with unusual initiator tRNAs and initiation codons in mycoplasmas.

Authors:  Shreya Ahana Ayyub; Divya Dobriyal; Riyaz Ahmad Shah; Kuldeep Lahry; Madhumita Bhattacharyya; Souvik Bhattacharyya; Saikat Chakrabarti; Umesh Varshney
Journal:  RNA Biol       Date:  2017-09-29       Impact factor: 4.652

10.  Allosteric control of the ribosome by small-molecule antibiotics.

Authors:  Leyi Wang; Arto Pulk; Michael R Wasserman; Michael B Feldman; Roger B Altman; Jamie H Doudna Cate; Scott C Blanchard
Journal:  Nat Struct Mol Biol       Date:  2012-08-19       Impact factor: 15.369

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