Literature DB >> 14527688

High-throughput screening of structural proteomics targets using NMR.

Leonor M P Galvão-Botton1, Angela M Katsuyama, Cristiane R Guzzo, Fábio C L Almeida, Chuck S Farah, Ana Paula Valente.   

Abstract

We applied a high-throughput strategy for the screening of targets for structural proteomics of Xanthomonas axonopodis pv citri. This strategy is based on the rapid (1)H-(15)N HSQC NMR analysis of bacterial lysates containing selectively (15)N-labelled heterologous proteins. Our analysis permitted us to classify the 19 soluble candidates in terms of 'foldedness', that is, the extent to which they present a well-folded solution structure, as reflected by the quality of their NMR spectra. This classification allowed us to define a priority list to be used as a guide to select protein candidates for further structural studies.

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Year:  2003        PMID: 14527688     DOI: 10.1016/s0014-5793(03)00926-8

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  14 in total

1.  Recent advances in GFP folding reporter and split-GFP solubility reporter technologies. Application to improving the folding and solubility of recalcitrant proteins from Mycobacterium tuberculosis.

Authors:  Stéphanie Cabantous; Jean-Denis Pédelacq; Brian L Mark; Cleo Naranjo; Thomas C Terwilliger; Geoffrey S Waldo
Journal:  J Struct Funct Genomics       Date:  2005

2.  Expression, purification, crystallization and preliminary X-ray analysis of YaeQ (XAC2396) from Xanthomonas axonopodis pv. citri.

Authors:  Cristiane R Guzzo; Ronaldo A P Nagem; Leonor M P Galvão-Botton; Beatriz G Guimarães; Francisco J Medrano; João A R G Barbosa; Chuck S Farah
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-04-22

3.  Enhanced bacterial protein expression during auto-induction obtained by alteration of lac repressor dosage and medium composition.

Authors:  Paul G Blommel; Katie J Becker; Petar Duvnjak; Brian G Fox
Journal:  Biotechnol Prog       Date:  2007-05-17

4.  Automated protein NMR structure determination in crude cell-extract.

Authors:  Touraj Etezady-Esfarjani; Torsten Herrmann; Reto Horst; Kurt Wüthrich
Journal:  J Biomol NMR       Date:  2006-01       Impact factor: 2.835

5.  Characterizing proteins in a native bacterial environment using solid-state NMR spectroscopy.

Authors:  Siddarth Narasimhan; Cecilia Pinto; Alessandra Lucini Paioni; Johan van der Zwan; Gert E Folkers; Marc Baldus
Journal:  Nat Protoc       Date:  2021-01-13       Impact factor: 13.491

6.  NMR for structural proteomics of Thermotoga maritima: screening and structure determination.

Authors:  Wolfgang Peti; Touraj Etezady-Esfarjani; Torsten Herrmann; Heath E Klock; Scott A Lesley; Kurt Wüthrich
Journal:  J Struct Funct Genomics       Date:  2004

7.  Expression, crystallization and preliminary crystallographic analysis of SufE (XAC2355) from Xanthomonas axonopodis pv. citri.

Authors:  Cristiane R Guzzo; Lucicleide R Silva; Leonor M P Galvão-Botton; João A R G Barbosa; Chuck S Farah
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-02-24

8.  Autoinduction of protein expression.

Authors:  Brian G Fox; Paul G Blommel
Journal:  Curr Protoc Protein Sci       Date:  2009-04

9.  Protein nuclear magnetic resonance under physiological conditions.

Authors:  Gary J Pielak; Conggang Li; Andrew C Miklos; Alexander P Schlesinger; Kristin M Slade; Gui-Fang Wang; Imola G Zigoneanu
Journal:  Biochemistry       Date:  2009-01-20       Impact factor: 3.162

10.  1H, 15N and 13C resonance assignments of the ApaG protein of the phytopathogen Xanthomonas axonopodis pv. citri.

Authors:  Angela M Katsuyama; Daniel O Cicero; Alberto Spisni; Maurizio Paci; Chuck S Farah; Thelma A Pertinhez
Journal:  J Biomol NMR       Date:  2004-07       Impact factor: 2.835

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