Literature DB >> 14516762

A linkage map of the basidiomycete Coprinus cinereus based on random amplified polymorphic DNAs and restriction fragment length polymorphisms.

Hajime Muraguchi1, Yasuhiro Ito, Takashi Kamada, Sonoe O Yanagi.   

Abstract

A genetic linkage map of the basidiomycete Coprinus cinereus was constructed on the basis of the segregation of 219 RAPD markers, 28 RFLP markers and the A and B mating-type loci among 40 random basidiospore progeny from a single cross between a wild-type homokaryon, KF(3)#2, and an AmutBmut strain, #326. Thirteen linkage groups covering a total of 1346cM were identified and correlated to the 13 chromosomes of this fungus by hybridization of RFLP and RAPD marker probes to CHEF blots. These probes also revealed chromosome length polymorphisms (CLP), which could be associated with haplotype plots of the progeny. The average kb/cM ratio in this cross was approximately 27.9kb/cM. The AmutBmut strain undergoes sexual development without mating, because of mutations in both A and B mating-type loci, and has been used to identify mutations affecting developmental processes such as dikaryosis, fruit body morphogenesis, and meiosis. The markers in the map, especially the RAPD ones, would facilitate mapping of genes responsible for such mutations induced in the AmutBmut strain.

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Year:  2003        PMID: 14516762     DOI: 10.1016/s1087-1845(03)00087-2

Source DB:  PubMed          Journal:  Fungal Genet Biol        ISSN: 1087-1845            Impact factor:   3.495


  15 in total

1.  A mutation in the Cc.arp9 gene encoding a putative actin-related protein causes defects in fruiting initiation and asexual development in the agaricomycete Coprinopsis cinerea.

Authors:  Takehito Nakazawa; Yuki Ando; Takeshi Hata; Kiyoshi Nakahori
Journal:  Curr Genet       Date:  2016-01-08       Impact factor: 3.886

2.  Identification and characterisation of structural maintenance of chromosome 1 (smc1) mutants of Coprinopsis cinerea.

Authors:  Hajime Muraguchi; Kousuke Abe; Minako Nakagawa; Kiyoto Nakamura; Sonoe O Yanagi
Journal:  Mol Genet Genomics       Date:  2008-07-02       Impact factor: 3.291

3.  Construction of a genetic linkage map of the fungal pathogen of banana Mycosphaerella fijiensis, causal agent of black leaf streak disease.

Authors:  Gilberto Manzo-Sánchez; Marie-Françoise Zapater; Francisco Luna-Martínez; Laura Conde-Ferráez; Jean Carlier; Andrew James-Kay; June Simpson
Journal:  Curr Genet       Date:  2008-03-26       Impact factor: 3.886

4.  A 14-bp stretch plays a critical role in regulating gene expression from β1-tubulin promoters of basidiomycetes.

Authors:  Dong Xuan Nguyen; Taku Sakaguchi; Takehito Nakazawa; Masahiro Sakamoto; Yoichi Honda
Journal:  Curr Genet       Date:  2019-07-06       Impact factor: 3.886

5.  Construction of a genetic linkage map based on amplified fragment length polymorphism markers and development of sequence-tagged site markers for marker-assisted selection of the sporeless trait in the oyster mushroom (Pleurotus eryngii).

Authors:  Yasuhito Okuda; Jun Ueda; Yasushi Obatake; Shigeyuki Murakami; Yukitaka Fukumasa; Teruyuki Matsumoto
Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

6.  Chromosomal assembly and analyses of genome-wide recombination rates in the forest pathogenic fungus Armillaria ostoyae.

Authors:  Renate Heinzelmann; Daniel Rigling; György Sipos; Martin Münsterkötter; Daniel Croll
Journal:  Heredity (Edinb)       Date:  2020-03-13       Impact factor: 3.821

7.  The laccase multi-gene family in Coprinopsis cinerea has seventeen different members that divide into two distinct subfamilies.

Authors:  Sreedhar Kilaru; Patrik J Hoegger; Ursula Kües
Journal:  Curr Genet       Date:  2006-04-28       Impact factor: 3.886

8.  Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).

Authors:  Jason E Stajich; Sarah K Wilke; Dag Ahrén; Chun Hang Au; Bruce W Birren; Mark Borodovsky; Claire Burns; Björn Canbäck; Lorna A Casselton; C K Cheng; Jixin Deng; Fred S Dietrich; David C Fargo; Mark L Farman; Allen C Gathman; Jonathan Goldberg; Roderic Guigó; Patrick J Hoegger; James B Hooker; Ashleigh Huggins; Timothy Y James; Takashi Kamada; Sreedhar Kilaru; Chinnapa Kodira; Ursula Kües; Doris Kupfer; H S Kwan; Alexandre Lomsadze; Weixi Li; Walt W Lilly; Li-Jun Ma; Aaron J Mackey; Gerard Manning; Francis Martin; Hajime Muraguchi; Donald O Natvig; Heather Palmerini; Marilee A Ramesh; Cathy J Rehmeyer; Bruce A Roe; Narmada Shenoy; Mario Stanke; Vardges Ter-Hovhannisyan; Anders Tunlid; Rajesh Velagapudi; Todd J Vision; Qiandong Zeng; Miriam E Zolan; Patricia J Pukkila
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-14       Impact factor: 11.205

9.  Flutolanil and carboxin resistance in Coprinus cinereus conferred by a mutation in the cytochrome b560 subunit of succinate dehydrogenase complex (Complex II).

Authors:  Y Ito; H Muraguchi; Y Seshime; S Oita; S O Yanagi
Journal:  Mol Genet Genomics       Date:  2004-09-08       Impact factor: 3.291

10.  A genetic linkage map of Venturia inaequalis, the causal agent of apple scab.

Authors:  Xiangming Xu; Tony Roberts; Dez Barbara; Nick G Harvey; Liqiang Gao; Daniel J Sargent
Journal:  BMC Res Notes       Date:  2009-08-18
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