Literature DB >> 14499892

Analysis of thermal hysteresis protein hydration using the random network model.

Kelly Ryan Gallagher1, Kim A Sharp.   

Abstract

The hydration of polar and apolar groups can be explained quantitatively, via the random network model of water, in terms of differential distortions in first hydration shell water-water hydrogen bonding angle. This method of analyzing solute induced structural distortions of water is applied to study the ice-binding type III thermal hysteresis protein. The analysis reveals subtle but significant differences in solvent structuring of the ice-binding surface, compared to non-ice binding protein surface. The major differences in hydration in the ice-binding region are (i). polar groups have a very apolar-like hydration. (ii). there is more uniform hydration structure. Overall, this surface strongly enhances the tetrahedral, or ice-like, hydration within the primary hydration shell. It is concluded that these two specific features of the hydration structure are important for this surface to recognize, and preferentially interact with nascent ice crystals forming in liquid water.

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Year:  2003        PMID: 14499892     DOI: 10.1016/s0301-4622(03)00087-5

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  12 in total

Review 1.  Protein-solvent interactions.

Authors:  Ninad Prabhu; Kim Sharp
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

2.  Anchored clathrate waters bind antifreeze proteins to ice.

Authors:  Christopher P Garnham; Robert L Campbell; Peter L Davies
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-11       Impact factor: 11.205

3.  Observation of ice-like water layers at an aqueous protein surface.

Authors:  Konrad Meister; Simona Strazdaite; Arthur L DeVries; Stephan Lotze; Luuk L C Olijve; Ilja K Voets; Huib J Bakker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-02       Impact factor: 11.205

4.  Antifreeze protein hydration waters: Unstructured unless bound to ice.

Authors:  Sean M Marks; Amish J Patel
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-06       Impact factor: 11.205

5.  Water in the half shell: structure of water, focusing on angular structure and solvation.

Authors:  Kim A Sharp; Jane M Vanderkooi
Journal:  Acc Chem Res       Date:  2010-02-16       Impact factor: 22.384

6.  Re-evaluation of a bacterial antifreeze protein as an adhesin with ice-binding activity.

Authors:  Shuaiqi Guo; Christopher P Garnham; John C Whitney; Laurie A Graham; Peter L Davies
Journal:  PLoS One       Date:  2012-11-07       Impact factor: 3.240

7.  Investigation of changes in structure and thermodynamic of spruce budworm antifreeze protein under subfreezing temperature.

Authors:  Hung Nguyen; Ly Le
Journal:  Sci Rep       Date:  2017-01-20       Impact factor: 4.379

8.  Concentration-dependent oligomerization of an alpha-helical antifreeze polypeptide makes it hyperactive.

Authors:  Sheikh Mahatabuddin; Yuichi Hanada; Yoshiyuki Nishimiya; Ai Miura; Hidemasa Kondo; Peter L Davies; Sakae Tsuda
Journal:  Sci Rep       Date:  2017-02-13       Impact factor: 4.379

9.  Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein.

Authors:  Sheikh Mahatabuddin; Daichi Fukami; Tatsuya Arai; Yoshiyuki Nishimiya; Rumi Shimizu; Chie Shibazaki; Hidemasa Kondo; Motoyasu Adachi; Sakae Tsuda
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-07       Impact factor: 11.205

10.  An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes.

Authors:  Akari Yamauchi; Tatsuya Arai; Hidemasa Kondo; Yuji C Sasaki; Sakae Tsuda
Journal:  Biomolecules       Date:  2020-05-13
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