Literature DB >> 1427083

Protein-coding introns from the 23S rRNA-encoding gene form stable circles in the hyperthermophilic archaeon Pyrobaculum organotrophum.

J Z Dalgaard1, R A Garrett.   

Abstract

Two archaeal introns have been discovered in the single-copy 23S rRNA-encoding gene of the hyperthermophile, Pyrobaculum organotrophum. After excision from rRNA transcripts, both introns circularize and are stably retained in the cell. Putative proteins encoded by the introns and covering most of the intron sequence share a decapeptide motif with proteins encoded by another archaeal intron and by group I introns.

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Year:  1992        PMID: 1427083     DOI: 10.1016/0378-1119(92)90167-n

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  26 in total

1.  Molecular phylogenetic analysis of archaeal intron-containing genes coding for rRNA obtained from a deep-subsurface geothermal water pool.

Authors:  K Takai; K Horikoshi
Journal:  Appl Environ Microbiol       Date:  1999-12       Impact factor: 4.792

2.  RNA-protein interactions of an archaeal homotetrameric splicing endoribonuclease with an exceptional evolutionary history.

Authors:  J Lykke-Andersen; R A Garrett
Journal:  EMBO J       Date:  1997-10-15       Impact factor: 11.598

3.  Mapping the RNA-Seq trash bin: unusual transcripts in prokaryotic transcriptome sequencing data.

Authors:  Gero Doose; Maria Alexis; Rebecca Kirsch; Sven Findeiß; David Langenberger; Rainer Machné; Mario Mörl; Steve Hoffmann; Peter F Stadler
Journal:  RNA Biol       Date:  2013-05-13       Impact factor: 4.652

4.  Circular mRNA can direct translation of extremely long repeating-sequence proteins in vivo.

Authors:  R Perriman; M Ares
Journal:  RNA       Date:  1998-09       Impact factor: 4.942

5.  Statistical modeling and analysis of the LAGLIDADG family of site-specific endonucleases and identification of an intein that encodes a site-specific endonuclease of the HNH family.

Authors:  J Z Dalgaard; A J Klar; M J Moser; W R Holley; A Chatterjee; I S Mian
Journal:  Nucleic Acids Res       Date:  1997-11-15       Impact factor: 16.971

6.  Protein footprinting approach to mapping DNA binding sites of two archaeal homing enzymes: evidence for a two-domain protein structure.

Authors:  J Lykke-Andersen; R A Garrett; J Kjems
Journal:  Nucleic Acids Res       Date:  1996-10-15       Impact factor: 16.971

Review 7.  Homing endonucleases: keeping the house in order.

Authors:  M Belfort; R J Roberts
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

8.  Engineering and expressing circular RNAs via tRNA splicing.

Authors:  John J Noto; Casey A Schmidt; A Gregory Matera
Journal:  RNA Biol       Date:  2017-04-12       Impact factor: 4.652

9.  High-throughput sequencing reveals circular substrates for an archaeal RNA ligase.

Authors:  Hubert F Becker; Alice Héliou; Kamel Djaout; Roxane Lestini; Mireille Regnier; Hannu Myllykallio
Journal:  RNA Biol       Date:  2017-03-09       Impact factor: 4.652

10.  Molecular biology of extremophiles.

Authors:  M Ciaramella; R Cannio; M Moracci; F M Pisani; M Rossi
Journal:  World J Microbiol Biotechnol       Date:  1995-01       Impact factor: 3.312

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