Literature DB >> 1425665

Heme-pocket-hydration change during the inactivation of cytochrome P-450camphor by hydrostatic pressure.

C Di Primo1, G Hui Bon Hoa, P Douzou, S G Sligar.   

Abstract

Hydrostatic pressure has been used to convert cytochrome P-450camphor to cytochrome P-420. The latter is an inactivated but soluble and undenaturated form of cytochrome P-450camphor. Using camphor analogues as probes of the active site we show that the inactivation volume change is directly correlated to the initial degree of hydration of the heme pocket. The values range between -73 ml/mol and -197 ml/mol [Di Primo, C., Hui Bon Hoa, G., Douzou, P. & Sligar, S. G. (1990) Eur. J. Biochem. 193, 383-386] for a totally hydrated (substrate-free, low-spin, six coordinated heme iron) and a non-hydrated (camphor-bound, high-spin, five coordinated heme iron) heme pocket. These results suggest that the larger value, -197 ml/mol, for the inactivation volume change is due to a hydration change of the heme pocket resulting from the displacement of the substrate during the compression and the subsequent entrance of water molecules. Similarly, the stability of the protein against compression is correlated with water accessibility to the active site. Increase in substrate mobility by loss of specific interactions with both regions of well defined secondary structure of cytochrome P-450camphor results in an increase of water accessibility and decrease of stability. Thus for camphor and adamantanone which strongly interact with the protein and exclude water from the active site [Poulos, T. L., Finzel, B. C. & Howard, A. J. (1987) J. Mol. Biol. 195, 687-700; Raag, R. & Poulos, T. L. (1989) Biochemistry 28, 917-922] the increase in stability compared to the free protein is roughly 30 kJ/mol at 20 degrees C. With smaller substrates such as norcamphor, which loosely fits into the active site and does not completely exclude water [Raag, R. & Poulos, T. L. (1989) Biochemistry 28, 917-922], the increase in stability is only 7 kJ/mol. Finally these results suggest that cytochrome P-420 induced by hydrostatic pressure is a unique form where the active site is hydrated and camphor is displaced from its binding site.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1425665     DOI: 10.1111/j.1432-1033.1992.tb17323.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  11 in total

1.  Antagonistic effects of hydrostatic pressure and osmotic pressure on cytochrome P-450cam spin transition.

Authors:  C Di Primo; E Deprez; G H Hoa; P Douzou
Journal:  Biophys J       Date:  1995-05       Impact factor: 4.033

2.  Thermodynamics of water mediating protein-ligand interactions in cytochrome P450cam: a molecular dynamics study.

Authors:  V Helms; R C Wade
Journal:  Biophys J       Date:  1995-09       Impact factor: 4.033

3.  Cytochrome P450 from Photobacterium profundum SS9, a piezophilic bacterium, exhibits a tightened control of water access to the active site.

Authors:  Elena V Sineva; Dmitri R Davydov
Journal:  Biochemistry       Date:  2010-11-23       Impact factor: 3.162

4.  A complete volume profile for the reversible binding of camphor to cytochrome P450(cam).

Authors:  Alicja Franke; Elisabeth Hartmann; Ilme Schlichting; Rudi van Eldik
Journal:  J Biol Inorg Chem       Date:  2012-01-19       Impact factor: 3.358

5.  Effect of Ligands on HP-Induced Unfolding and Oligomerization of β-Lactoglobulin.

Authors:  Simeon Minić; Burkhard Annighöfer; Arnaud Hélary; Djemel Hamdane; Gaston Hui Bon Hoa; Camille Loupiac; Annie Brûlet; Sophie Combet
Journal:  Biophys J       Date:  2020-10-29       Impact factor: 4.033

6.  Rational engineering of cytochromes P450 2B6 and 2B11 for enhanced stability: Insights into structural importance of residue 334.

Authors:  Jyothi C Talakad; P Ross Wilderman; Dmitri R Davydov; Santosh Kumar; James R Halpert
Journal:  Arch Biochem Biophys       Date:  2009-11-26       Impact factor: 4.013

7.  Allosteric mechanisms in cytochrome P450 3A4 studied by high-pressure spectroscopy: pivotal role of substrate-induced changes in the accessibility and degree of hydration of the heme pocket.

Authors:  Dmitri R Davydov; Bradley J Baas; Stephen G Sligar; James R Halpert
Journal:  Biochemistry       Date:  2007-06-08       Impact factor: 3.162

8.  Allosteric transitions in cytochrome P450eryF explored with pressure-perturbation spectroscopy, lifetime FRET, and a novel fluorescent substrate, Fluorol-7GA.

Authors:  Dmitri R Davydov; Nadezhda Y Davydova; James R Halpert
Journal:  Biochemistry       Date:  2008-10-02       Impact factor: 3.162

9.  Role of substrate on the conformational stability of the heme active site of cytochrome P450cam: effect of temperature and low concentrations of denaturants.

Authors:  R Murugan; Shyamalava Mazumdar
Journal:  J Biol Inorg Chem       Date:  2004-05-04       Impact factor: 3.358

10.  Kinetic Evidence for an Induced Fit Mechanism in the Binding of the Substrate Camphor by Cytochrome P450cam.

Authors:  F Peter Guengerich; Stella A Child; Ian R Barckhausen; Margo H Goldfarb
Journal:  ACS Catal       Date:  2020-12-29       Impact factor: 13.084

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.