Literature DB >> 19944064

Rational engineering of cytochromes P450 2B6 and 2B11 for enhanced stability: Insights into structural importance of residue 334.

Jyothi C Talakad1, P Ross Wilderman, Dmitri R Davydov, Santosh Kumar, James R Halpert.   

Abstract

Rational mutagenesis was used to improve the thermal stability of human cytochrome P450 2B6 and canine P450 2B11. Comparison of the amino acid sequences revealed seven sites that are conserved between the stable 2B1 and 2B4 but different from those found in the less stable 2B6 and 2B11. P334S was the only mutant that showed increased heterologous expression levels and thermal stability in both 2B6 and 2B11. The mechanism of this effect was explored with pressure-perturbation spectroscopy. Compressibility of the heme pocket in variants of all four CYP2B enzymes containing proline at position 334 are characterized by lower compressibility than their more stable serine 334 counterpart. Therefore, the stabilizing effect of P334S is associated with increased conformational flexibility in the region of the heme pocket. Improved stability of P334S 2B6 and 2B11 may facilitate the studies of these enzymes by X-ray crystallography and biophysical techniques. 2009 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 19944064      PMCID: PMC2819625          DOI: 10.1016/j.abb.2009.11.026

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  36 in total

1.  Structure-function analysis of human cytochrome P-450 2B6 using a novel substrate, site-directed mutagenesis, and molecular modeling.

Authors:  T L Domanski; K M Schultz; F Roussel; J C Stevens; J R Halpert
Journal:  J Pharmacol Exp Ther       Date:  1999-09       Impact factor: 4.030

2.  2,2',3,3',6,6'-hexachlorobiphenyl hydroxylation by active site mutants of cytochrome P450 2B1 and 2B11.

Authors:  S C Waller; Y A He; G R Harlow; Y Q He; E A Mash; J R Halpert
Journal:  Chem Res Toxicol       Date:  1999-08       Impact factor: 3.739

3.  Comparative Fourier transform infrared studies of the secondary structure and the CO heme ligand environment in cytochrome P-450cam and cytochrome P-420cam.

Authors:  C Mouro; C Jung; A Bondon; G Simonneaux
Journal:  Biochemistry       Date:  1997-07-01       Impact factor: 3.162

4.  Dynamics of protein-bound water in the heme domain of P450BM3 studied by high-pressure spectroscopy: comparison with P450cam and P450 2B4.

Authors:  D R Davydov; G Hui Bon Hoa; J A Peterson
Journal:  Biochemistry       Date:  1999-01-12       Impact factor: 3.162

5.  Alanine-scanning mutagenesis of a putative substrate recognition site in human cytochrome P450 3A4. Role of residues 210 and 211 in flavonoid activation and substrate specificity.

Authors:  G R Harlow; J R Halpert
Journal:  J Biol Chem       Date:  1997-02-28       Impact factor: 5.157

6.  Chaperone coexpression plasmids: differential and synergistic roles of DnaK-DnaJ-GrpE and GroEL-GroES in assisting folding of an allergen of Japanese cedar pollen, Cryj2, in Escherichia coli.

Authors:  K Nishihara; M Kanemori; M Kitagawa; H Yanagi; T Yura
Journal:  Appl Environ Microbiol       Date:  1998-05       Impact factor: 4.792

7.  Thermodynamic studies of substrate binding and spin transitions in human cytochrome P-450 3A4 expressed in yeast microsomes.

Authors:  J P Renaud; D R Davydov; K P Heirwegh; D Mansuy; G H Hui Bon Hoa
Journal:  Biochem J       Date:  1996-11-01       Impact factor: 3.857

8.  [The use of selective chemical modification of cytochrome P450scc (CYPXIA1) with fluorescein isothiocyanate for evaluation of intramolecular distances and conformational changes by fluorescent resonance energy transfer].

Authors:  G I Lepesheva; S A Usanov
Journal:  Biokhimiia       Date:  1996-08

9.  Directed evolution of mammalian cytochrome P450 2B1: mutations outside of the active site enhance the metabolism of several substrates, including the anticancer prodrugs cyclophosphamide and ifosfamide.

Authors:  Santosh Kumar; Chong S Chen; David J Waxman; James R Halpert
Journal:  J Biol Chem       Date:  2005-03-17       Impact factor: 5.157

10.  Active sites of two orthologous cytochromes P450 2E1: differences revealed by spectroscopic methods.

Authors:  Eva Anzenbacherova; Jiri Hudecek; Daniel Murgida; Peter Hildebrandt; Stéphane Marchal; Reinhard Lange; Pavel Anzenbacher
Journal:  Biochem Biophys Res Commun       Date:  2005-08-22       Impact factor: 3.575

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  8 in total

1.  Functional importance of a peripheral pocket in mammalian cytochrome P450 2B enzymes.

Authors:  Hyun-Hee Jang; Jingbao Liu; Ga-Young Lee; James R Halpert; P Ross Wilderman
Journal:  Arch Biochem Biophys       Date:  2015-08-28       Impact factor: 4.013

2.  Investigation by site-directed mutagenesis of the role of cytochrome P450 2B4 non-active-site residues in protein-ligand interactions based on crystal structures of the ligand-bound enzyme.

Authors:  P Ross Wilderman; Sean C Gay; Hyun-Hee Jang; Qinghai Zhang; C David Stout; James R Halpert
Journal:  FEBS J       Date:  2011-11-25       Impact factor: 5.542

Review 3.  Plasticity of CYP2B enzymes: structural and solution biophysical methods.

Authors:  P Ross Wilderman; James R Halpert
Journal:  Curr Drug Metab       Date:  2012-02       Impact factor: 3.731

4.  Comparison of in vitro metabolism of ticlopidine by human cytochrome P450 2B6 and rabbit cytochrome P450 2B4.

Authors:  Jyothi C Talakad; Manish B Shah; Gregory S Walker; Cathie Xiang; James R Halpert; Deepak Dalvie
Journal:  Drug Metab Dispos       Date:  2010-12-14       Impact factor: 3.922

5.  Constrained water access to the active site of cytochrome P450 from the piezophilic bacterium Photobacterium profundum.

Authors:  Elena V Sineva; Dmitri R Davydov
Journal:  High Press Res       Date:  2010-12-01       Impact factor: 1.431

6.  Functional characterization of cytochromes P450 2B from the desert woodrat Neotoma lepida.

Authors:  P Ross Wilderman; Hyun-Hee Jang; Jael R Malenke; Mariam Salib; Elisabeth Angermeier; Sonia Lamime; M Denise Dearing; James R Halpert
Journal:  Toxicol Appl Pharmacol       Date:  2013-12-19       Impact factor: 4.219

7.  SNP genetic polymorphisms of MDR-1, CYP1A2 and CYPB11 genes in four canine breeds upon toxicological evaluation.

Authors:  Rosa Gagliardi; Silvia Llambí; M Victoria Arruga
Journal:  J Vet Sci       Date:  2015-03-20       Impact factor: 1.672

8.  Analysis of Cytochrome P450 Conserved Sequence Motifs between Helices E and H: Prediction of Critical Motifs and Residues in Enzyme Functions.

Authors:  Numan Oezguen; Santosh Kumar
Journal:  J Drug Metab Toxicol       Date:  2011-08-30
  8 in total

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