Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Polymorphic microsatellite loci of the rat (Rattus norvegicus).

Literature DB >> 1421764

Polymorphic microsatellite loci of the rat (Rattus norvegicus).

T Kunieda¹, E Kobayashi, M Tachibana, H Ikadai, T Imamichi.

Abstract

The EMBL and GenBank DNA databases were searched for microsatellite sequences of the rat containing dinucleotide repeats of (CA)n and (GA)n. Among those obtained, 23 sequences were analyzed by polymerase chain reaction to examine the size variation of the amplified fragment in inbred rat strains. All of the 23 microsatellite sequences varied in size among the strains tested. The 23 microsatellite loci in a pair of substrains separated from the same progenitor strain were then analyzed. Fragments identical in size were observed in all loci of the two substrains, indicating the stability of the microsatellite over a large number of generations. The microsatellite loci, therefore, should be useful markers for linkage analyses in the rat.

Entities: Chemical Species

Mesh：

Substances：

Year: 1992 PMID： 1421764 DOI： 10.1007/bf00350622

Source DB: PubMed Journal: Mamm Genome ISSN： 0938-8990 Impact factor: 2.957

21 in total

1. The generation of a library of PCR-analyzed microsatellite variants for genetic mapping of the mouse genome.

Authors: R J Cornall; T J Aitman; C M Hearne; J A Todd
Journal: Genomics Date: 1991-08 Impact factor: 5.736

2. Hypervariability of simple sequences as a general source for polymorphic DNA markers.

Authors: D Tautz
Journal: Nucleic Acids Res Date: 1989-08-25 Impact factor: 16.971

3. Five polymorphic microsatellite VNTRs on the human X chromosome.

Authors: J A Luty; Z Guo; H F Willard; D H Ledbetter; S Ledbetter; M Litt
Journal: Am J Hum Genet Date: 1990-04 Impact factor: 11.025

4. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.

Authors: R K Saiki; D H Gelfand; S Stoffel; S J Scharf; R Higuchi; G T Horn; K B Mullis; H A Erlich
Journal: Science Date: 1988-01-29 Impact factor: 47.728

5. Clustering of hypervariable minisatellites in the proterminal regions of human autosomes.

Authors: N J Royle; R E Clarkson; Z Wong; A J Jeffreys
Journal: Genomics Date: 1988-11 Impact factor: 5.736

6. Hypervariable 'minisatellite' regions in human DNA.

Authors: A J Jeffreys; V Wilson; S L Thein
Journal: Nature Date: 1985 Mar 7-13 Impact factor: 49.962

7. The cellular retinol binding protein II gene. Sequence analysis of the rat gene, chromosomal localization in mice and humans, and documentation of its close linkage to the cellular retinol binding protein gene.

Authors: L A Demmer; E H Birkenmeier; D A Sweetser; M S Levin; S Zollman; R S Sparkes; T Mohandas; A J Lusis; J I Gordon
Journal: J Biol Chem Date: 1987-02-25 Impact factor: 5.157

8. The conservation of dinucleotide microsatellites among mammalian genomes allows the use of heterologous PCR primer pairs in closely related species.

Authors: S S Moore; L L Sargeant; T J King; J S Mattick; M Georges; D J Hetzel
Journal: Genomics Date: 1991-07 Impact factor: 5.736

9. Evolution and distribution of (GT)n repetitive sequences in mammalian genomes.

Authors: R L Stallings; A F Ford; D Nelson; D C Torney; C E Hildebrand; R K Moyzis
Journal: Genomics Date: 1991-07 Impact factor: 5.736

10. Towards construction of a high resolution map of the mouse genome using PCR-analysed microsatellites.

Authors: J M Love; A M Knight; M A McAleer; J A Todd
Journal: Nucleic Acids Res Date: 1990-07-25 Impact factor: 16.971

13 in total

1. Localization of a Na+,K(+)-ATPase alpha 2 subunit gene, Atp1a2, on rat chromosome 13.

Authors: E Kobayashi; M Tachibana; H Ikadai; T Kunieda
Journal: Mamm Genome Date: 1995-12 Impact factor: 2.957

2. Localization of a Moloney murine leukemia virus integration site gene, Mlvi2, on rat chromosome 2.

Authors: T Kunieda; E Kobayashi; M Tachibana; H Ikadai
Journal: Mamm Genome Date: 1996-12 Impact factor: 2.957

3. Mapping of rat chromosome 5 markers generated from chromosome-sorted DNA.

Authors: A Y Deng; C M Jackson; B Hoebee; J P Rapp
Journal: Mamm Genome Date: 1997-08 Impact factor: 2.957

4. A genetic map of microsatellite markers on rat chromosome 7.

Authors: Y Du; E F Remmers; H Zha; E A Goldmuntz; J Szpirer; C Szpirer; R L Wilder
Journal: Mamm Genome Date: 1995-04 Impact factor: 2.957

5. A genetic linkage map of rat chromosome 5 reveals extensive linkage conservation with mouse chromosome 4.

Authors: E Kobayashi; M Tachibana; H Ikadai; T Kunieda
Journal: Mamm Genome Date: 1994-04 Impact factor: 2.957

6. Mapping of two genetic loci, Ten-1 and Ten-2, associated with thymus enlargement in BUF/Mna rats.

Authors: Y Murakumo; M Takahashi; N Sharma; A Arakawa; M Saito; H Amo; M Matsuyama
Journal: Mamm Genome Date: 1996-07 Impact factor: 2.957

7. Chromosomal assignment of 11 loci in the rat by mouse-rat somatic hybrids and linkage.

Authors: A Y Deng; L Gu; J P Rapp; C Szpirer; J Szpirer
Journal: Mamm Genome Date: 1994-11 Impact factor: 2.957

8. Genetic map of rat chromosome 5 including the fatty (fa) locus.

Authors: G E Truett; H J Jacob; J Miller; G Drouin; N Bahary; J W Smoller; E S Lander; R L Leibel
Journal: Mamm Genome Date: 1995-01 Impact factor: 2.957

9. Mapping of a quantitative trait locus for blood pressure on rat chromosome 2.

Authors: A Y Deng; H Dene; J P Rapp
Journal: J Clin Invest Date: 1994-07 Impact factor: 14.808

10. Linkage among esterase-6 (Es-6), neural cell adhesion molecule (NCAM), and apolipoprotein C-III (apoc-3) genes on rat chromosome 8.

Authors: E Kobayashi; M Tachibana; H Ikadai; T Imamichi; T Kunieda
Journal: Mamm Genome Date: 1992 Impact factor: 2.957