Literature DB >> 1417749

A study of the stabilization of tetrahedral adducts by trypsin and delta-chymotrypsin.

M D Finucane1, J P Malthouse.   

Abstract

delta-Chymotrypsin has been alkylated by 1-13C- and 2-13C-enriched tosylphenylalanylchloromethane. In the intact inhibitor derivative, signals due to the 1-13C- and 2-13C-enriched carbon atoms have chemical shifts which titrate from 55.10 to 59.50 p.p.m. and from 99.10 to 103.66 p.p.m. respectively with similar pKa values of 8.99 and 8.85 respectively. These signals are assigned to a tetrahedral adduct formed between the hydroxy group of serine-195 and the inhibitor. An additional signal at 58.09 p.p.m. and at 204.85 p.p.m. in the 1-13C- and 2-13C-enzyme-inhibitor derivatives respectively does not titrate when the pH is changed and it is assigned to alkylated methionine-192. On denaturation/autolysis of the 1-13C-enriched enzyme-inhibitor derivative these signals associated with the intact inhibitor derivative are no longer detected, and a new signal, which titrates from 56.28 to 54.84 p.p.m. with a pKa of 5.26, is detected. The titration shift of this signal is assigned to the deprotonation of the imidazolium cation of alkylated histidine-57 in the denatured/autolysed enzyme-inhibitor derivative. Model compounds which form stable hydrates and hemiketals in aqueous solutions have been synthesized. By comparing the 13C titration shifts of these model compounds with those of the 13C enriched trypsin- and delta-chymotrypsin-inhibitor derivatives, we deduce that, in both of the intact enzyme-inhibitor derivatives, the zwitterionic tetrahedral adduct containing the imidazolium cation of histidine-57 and the hemiketal oxyanion predominates at alkaline pH values. It is estimated that in both the trypsin and delta-chymotrypsin-inhibitor derivatives the concentration of this zwitterionic tetrahedral adduct is 10,000-fold greater than it would be in water. We conclude that the pKa of the oxyanion of the hemiketal in the presence of the imidazolium cation of histidine-57 is 7.9 and 8.9 in the trypsin and delta-chymotrypsin-inhibitor derivatives respectively and that the pKa of the imidazolium cation of histidine-57 is greater than 7.9 and greater than 8.9 when the oxyanion is present as its conjugate acid, whereas, when the oxyanion is present, the pKa of the imidazolium cation is greater than 11 in both enzyme-inhibitor derivatives. We discuss how these enzymes preferentially stabilize zwitterionic tetrahedral adducts in the intact enzyme-inhibitor derivatives and how they could stabilize similar tetrahedral intermediates during catalysis. It is suggested that substrate binding could raise the pKa of the imidazolium cation of histidine-57 before tetrahedral-intermediate formation which would explain the enhanced nucleophilicity of the hydroxy group of serine-195.(ABSTRACT TRUNCATED AT 400 WORDS)

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Year:  1992        PMID: 1417749      PMCID: PMC1132987          DOI: 10.1042/bj2860889

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  39 in total

1.  The mechanism of the aminolysis of acetate esters.

Authors:  A C Satterthwait; W P Jencks
Journal:  J Am Chem Soc       Date:  1974-10-30       Impact factor: 15.419

2.  Stereochemical analysis of peptide bond hydrolysis catalyzed by the aspartic proteinase penicillopepsin.

Authors:  M N James; A R Sielecki
Journal:  Biochemistry       Date:  1985-07-02       Impact factor: 3.162

3.  A 13C-n.m.r. investigation of the ionizations within an inhibitor--alpha-chymotrypsin complex. Evidence that both alpha-chymotrypsin and trypsin stabilize a hemiketal oxyanion by similar mechanisms.

Authors:  M D Finucane; E A Hudson; J P Malthouse
Journal:  Biochem J       Date:  1989-03-15       Impact factor: 3.857

4.  Model for "charge-relay": acceleration by carboxylate anion in intramolecular general base-catalyzed ester hydrolysis by the imidazolyl group.

Authors:  M Komiyama; M L Bender; M Utaka; A Takeda
Journal:  Proc Natl Acad Sci U S A       Date:  1977-07       Impact factor: 11.205

5.  Structure of chymotrypsin-trifluoromethyl ketone inhibitor complexes: comparison of slowly and rapidly equilibrating inhibitors.

Authors:  K Brady; A Z Wei; D Ringe; R H Abeles
Journal:  Biochemistry       Date:  1990-08-21       Impact factor: 3.162

6.  pH dependence of the inhibition of chymotrypsin by a peptidyl trifluoromethyl ketone.

Authors:  K Brady; T C Liang; R H Abeles
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

7.  15N NMR spectroscopy of hydrogen-bonding interactions in the active site of serine proteases: evidence for a moving histidine mechanism.

Authors:  W W Bachovchin
Journal:  Biochemistry       Date:  1986-11-18       Impact factor: 3.162

8.  Complex of alpha-chymotrypsin and N-acetyl-L-leucyl-L-phenylalanyl trifluoromethyl ketone: structural studies with NMR spectroscopy.

Authors:  T C Liang; R H Abeles
Journal:  Biochemistry       Date:  1987-12-01       Impact factor: 3.162

9.  Transition-state stabilization at the oxyanion binding sites of serine and thiol proteinases: hydrolyses of thiono and oxygen esters.

Authors:  B Asbóth; L Polgár
Journal:  Biochemistry       Date:  1983-01-04       Impact factor: 3.162

10.  A 13C-n.m.r. investigation of ionizations within a trypsin-inhibitor complex. Evidence that the pKa of histidine-57 is raised by interaction with the hemiketal oxyanion.

Authors:  W U Primrose; A I Scott; N E Mackenzie; J P Malthouse
Journal:  Biochem J       Date:  1985-11-01       Impact factor: 3.857

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  8 in total

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Authors:  T P O'Connell; J P Malthouse
Journal:  Biochem J       Date:  1996-07-01       Impact factor: 3.857

2.  A 13C-NMR study of the role of Asn-155 in stabilizing the oxyanion of a subtilisin tetrahedral adduct.

Authors:  T P O'connell; R M Day; E V Torchilin; W W Bachovchin; J G Malthouse
Journal:  Biochem J       Date:  1997-09-15       Impact factor: 3.857

3.  13C-NMR study of the inhibition of delta-chymotrypsin by a tripeptide-glyoxal inhibitor.

Authors:  Aleksandra Djurdjevic-Pahl; Chandralal Hewage; J Paul G Malthouse
Journal:  Biochem J       Date:  2002-03-01       Impact factor: 3.857

4.  A study of the stabilization of the oxyanion of tetrahedral adducts by trypsin, chymotrypsin and subtilisin.

Authors:  T P O'Connell; J P Malthouse
Journal:  Biochem J       Date:  1995-04-15       Impact factor: 3.857

5.  A new lysine derived glyoxal inhibitor of trypsin, its properties and utilization for studying the stabilization of tetrahedral adducts by trypsin.

Authors:  Jennifer A Cleary; J Paul G Malthouse
Journal:  Biochem Biophys Rep       Date:  2016-01-04

6.  Probing contacts of inhibitor locked in transition states in the catalytic triad of DENV2 type serine protease and its mutants by 1H, 19F and 15 N NMR spectroscopy.

Authors:  Peter Agback; Esmeralda Woestenenk; Tatiana Agback
Journal:  BMC Mol Cell Biol       Date:  2020-05-25

7.  Kinetic Studies of the Effect of pH on the Trypsin-Catalyzed Hydrolysis of N-α-benzyloxycarbonyl-l-lysine-p-nitroanilide: Mechanism of Trypsin Catalysis.

Authors:  J Paul G Malthouse
Journal:  ACS Omega       Date:  2020-03-03

8.  Hemiacetal stabilization in a chymotrypsin inhibitor complex and the reactivity of the hydroxyl group of the catalytic serine residue of chymotrypsin.

Authors:  Jennifer A Cleary; William Doherty; Paul Evans; J Paul G Malthouse
Journal:  Biochim Biophys Acta       Date:  2014-03-21
  8 in total

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